Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 FITM1-202ENST00000559294 800 ntBASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 AP000525.1-201ENST00000608286 694 ntBASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CSNK1G1Q9HCP0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CSNK1G1Q9HCP0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 MMP23A-201ENST00000234610 1017 ntBASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 AP005242.2-201ENST00000580065 1175 ntBASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.33■□□□□ 0.85
CSNK1G1Q9HCP0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CSNK1G1Q9HCP0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSNK1G1Q9HCP0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSNK1G1Q9HCP0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CSNK1G1Q9HCP0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSNK1G1Q9HCP0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.33■□□□□ 0.84
CSNK1G1Q9HCP0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CSNK1G1Q9HCP0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.33■□□□□ 0.84
CSNK1G1Q9HCP0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.33■□□□□ 0.84
CSNK1G1Q9HCP0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 AC087499.1-201ENST00000418141 1075 ntBASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
CSNK1G1Q9HCP0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.31■□□□□ 0.84
CSNK1G1Q9HCP0 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms