Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RARRES2P6-201ENST00000567333 442 ntBASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.39■□□□□ 0.21
HDHD3Q9BSH5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 AL512625.2-201ENST00000417533 625 ntBASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 AL162430.1-201ENST00000480705 870 ntBASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 AL138781.2-201ENST00000617896 1843 ntBASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HDHD3Q9BSH5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 AC007613.1-201ENST00000572811 2597 ntBASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDHD3Q9BSH5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 AC138932.1-201ENST00000534164 6830 ntBASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 AC104581.1-202ENST00000635932 2618 ntBASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 AC006333.2-201ENST00000607957 2099 ntBASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.36■□□□□ 0.21
HDHD3Q9BSH5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms