Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PAAF1Q9BRP4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PAAF1Q9BRP4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
PAAF1Q9BRP4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 PCDHAC2-203ENST00000615316 3011 ntBASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
PAAF1Q9BRP4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 AC006011.2-201ENST00000621313 1158 ntBASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PAAF1Q9BRP4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.73■□□□□ 0.91
PAAF1Q9BRP4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PAAF1Q9BRP4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 AC128688.1-201ENST00000487626 519 ntBASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 DUX4L26-201ENST00000489078 1255 ntBASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.71■□□□□ 0.91
PAAF1Q9BRP4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms