Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.98■□□□□ 0.63
NPAS2Q99743 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS2Q99743 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS2Q99743 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.97■□□□□ 0.63
NPAS2Q99743 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NPAS2Q99743 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS2Q99743 POU5F1P3-201ENST00000428824 1078 ntBASIC18.97■□□□□ 0.63
NPAS2Q99743 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS2Q99743 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.97■□□□□ 0.63
NPAS2Q99743 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NPAS2Q99743 AL589743.5-201ENST00000616611 1050 ntBASIC18.97■□□□□ 0.63
NPAS2Q99743 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS2Q99743 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NPAS2Q99743 AC087633.2-202ENST00000565166 1439 ntBASIC18.97■□□□□ 0.63
NPAS2Q99743 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NPAS2Q99743 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS2Q99743 PTBP1P-201ENST00000554374 1601 ntBASIC18.96■□□□□ 0.63
NPAS2Q99743 AC007613.1-201ENST00000572811 2597 ntBASIC18.96■□□□□ 0.63
NPAS2Q99743 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS2Q99743 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 AC026471.1-201ENST00000564629 3026 ntBASIC18.96■□□□□ 0.63
NPAS2Q99743 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS2Q99743 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS2Q99743 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS2Q99743 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
NPAS2Q99743 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.96■□□□□ 0.63
NPAS2Q99743 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.96■□□□□ 0.63
NPAS2Q99743 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS2Q99743 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.96■□□□□ 0.63
NPAS2Q99743 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NPAS2Q99743 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.96■□□□□ 0.63
NPAS2Q99743 FAM201B-201ENST00000458407 597 ntBASIC18.96■□□□□ 0.63
NPAS2Q99743 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
NPAS2Q99743 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.96■□□□□ 0.63
NPAS2Q99743 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.96■□□□□ 0.63
NPAS2Q99743 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.96■□□□□ 0.63
NPAS2Q99743 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
NPAS2Q99743 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS2Q99743 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NPAS2Q99743 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.95■□□□□ 0.62
NPAS2Q99743 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.95■□□□□ 0.62
NPAS2Q99743 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 PGM5P4-201ENST00000421970 445 ntBASIC18.95■□□□□ 0.62
NPAS2Q99743 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NPAS2Q99743 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPAS2Q99743 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS2Q99743 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS2Q99743 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS2Q99743 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS2Q99743 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS2Q99743 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS2Q99743 AC020763.4-201ENST00000623414 4170 ntBASIC18.94■□□□□ 0.62
NPAS2Q99743 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS2Q99743 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NPAS2Q99743 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS2Q99743 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS2Q99743 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.94■□□□□ 0.62
NPAS2Q99743 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.94■□□□□ 0.62
NPAS2Q99743 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS2Q99743 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.94■□□□□ 0.62
NPAS2Q99743 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS2Q99743 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.94■□□□□ 0.62
NPAS2Q99743 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPAS2Q99743 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NPAS2Q99743 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms