Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 AC011506.1-201ENST00000474329 610 ntBASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 Z85996.1-201ENST00000494644 937 ntBASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 FITM1-202ENST00000559294 800 ntBASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 LINC01023-201ENST00000606054 436 ntBASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 AC079598.2-202ENST00000546624 1451 ntBASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 AC087499.1-201ENST00000418141 1075 ntBASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 AP005242.2-201ENST00000580065 1175 ntBASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 AP000692.2-201ENST00000608391 879 ntBASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDK5RAP1Q96SZ6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 FAM207BP-201ENST00000447172 505 ntBASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDK5RAP1Q96SZ6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CDK5RAP1Q96SZ6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 MIR1238-201ENST00000408483 83 ntBASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDK5RAP1Q96SZ6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 AC112907.3-201ENST00000577781 2400 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms