Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MS4A4EQ96PG1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.12■□□□□ 0.49
MS4A4EQ96PG1 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 ESRRAP1-201ENST00000400596 1257 ntBASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 MTDHP1-201ENST00000605323 784 ntBASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 NBPF21P-201ENST00000425093 1451 ntBASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MS4A4EQ96PG1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
MS4A4EQ96PG1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.09■□□□□ 0.49
MS4A4EQ96PG1 AC233263.1-201ENST00000578059 224 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms