Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.1■□□□□ 0.65
CFAP54Q96N23 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP54Q96N23 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP54Q96N23 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP54Q96N23 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CFAP54Q96N23 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.1■□□□□ 0.65
CFAP54Q96N23 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.1■□□□□ 0.65
CFAP54Q96N23 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CFAP54Q96N23 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP54Q96N23 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CFAP54Q96N23 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CFAP54Q96N23 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP54Q96N23 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP54Q96N23 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP54Q96N23 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP54Q96N23 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP54Q96N23 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP54Q96N23 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.09■□□□□ 0.65
CFAP54Q96N23 AL121672.3-201ENST00000608644 468 ntBASIC19.09■□□□□ 0.65
CFAP54Q96N23 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP54Q96N23 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CFAP54Q96N23 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CFAP54Q96N23 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CFAP54Q96N23 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CFAP54Q96N23 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CFAP54Q96N23 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CFAP54Q96N23 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.08■□□□□ 0.65
CFAP54Q96N23 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.08■□□□□ 0.65
CFAP54Q96N23 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CFAP54Q96N23 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CFAP54Q96N23 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.08■□□□□ 0.65
CFAP54Q96N23 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP54Q96N23 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CFAP54Q96N23 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.08■□□□□ 0.64
CFAP54Q96N23 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.08■□□□□ 0.64
CFAP54Q96N23 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP54Q96N23 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.08■□□□□ 0.64
CFAP54Q96N23 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CFAP54Q96N23 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.08■□□□□ 0.64
CFAP54Q96N23 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CFAP54Q96N23 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CFAP54Q96N23 AC244107.1-201ENST00000442033 332 ntBASIC19.07■□□□□ 0.64
CFAP54Q96N23 AC092597.1-201ENST00000487352 616 ntBASIC19.07■□□□□ 0.64
CFAP54Q96N23 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.07■□□□□ 0.64
CFAP54Q96N23 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CFAP54Q96N23 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
CFAP54Q96N23 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.07■□□□□ 0.64
CFAP54Q96N23 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.07■□□□□ 0.64
CFAP54Q96N23 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CFAP54Q96N23 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CFAP54Q96N23 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CFAP54Q96N23 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.07■□□□□ 0.64
CFAP54Q96N23 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.06■□□□□ 0.64
CFAP54Q96N23 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP54Q96N23 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP54Q96N23 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP54Q96N23 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP54Q96N23 AP003041.3-201ENST00000527151 707 ntBASIC19.06■□□□□ 0.64
CFAP54Q96N23 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 AC011298.2-201ENST00000617989 482 ntBASIC19.06■□□□□ 0.64
CFAP54Q96N23 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP54Q96N23 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP54Q96N23 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP54Q96N23 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CFAP54Q96N23 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.06■□□□□ 0.64
CFAP54Q96N23 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms