Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.66■□□□□ 0.74
SHDQ96IW2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SHDQ96IW2 AC007225.1-201ENST00000566331 1836 ntBASIC19.66■□□□□ 0.74
SHDQ96IW2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHDQ96IW2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SHDQ96IW2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.66■□□□□ 0.74
SHDQ96IW2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.65■□□□□ 0.74
SHDQ96IW2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHDQ96IW2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SHDQ96IW2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHDQ96IW2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHDQ96IW2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SHDQ96IW2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHDQ96IW2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SHDQ96IW2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SHDQ96IW2 PRELID1P1-202ENST00000567272 903 ntBASIC19.65■□□□□ 0.74
SHDQ96IW2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
SHDQ96IW2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.65■□□□□ 0.74
SHDQ96IW2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.65■□□□□ 0.74
SHDQ96IW2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHDQ96IW2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SHDQ96IW2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SHDQ96IW2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHDQ96IW2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHDQ96IW2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHDQ96IW2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHDQ96IW2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHDQ96IW2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.65■□□□□ 0.74
SHDQ96IW2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
SHDQ96IW2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHDQ96IW2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHDQ96IW2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHDQ96IW2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.64■□□□□ 0.73
SHDQ96IW2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.64■□□□□ 0.73
SHDQ96IW2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.64■□□□□ 0.73
SHDQ96IW2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.64■□□□□ 0.73
SHDQ96IW2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SHDQ96IW2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHDQ96IW2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.64■□□□□ 0.73
SHDQ96IW2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHDQ96IW2 FEM1AP4-201ENST00000443167 1987 ntBASIC19.64■□□□□ 0.73
SHDQ96IW2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHDQ96IW2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.63■□□□□ 0.73
SHDQ96IW2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHDQ96IW2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHDQ96IW2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.63■□□□□ 0.73
SHDQ96IW2 AP001271.2-201ENST00000624018 1556 ntBASIC19.63■□□□□ 0.73
SHDQ96IW2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHDQ96IW2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHDQ96IW2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHDQ96IW2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHDQ96IW2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHDQ96IW2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SHDQ96IW2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.63■□□□□ 0.73
SHDQ96IW2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SHDQ96IW2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.63■□□□□ 0.73
SHDQ96IW2 AC092329.2-201ENST00000598402 547 ntBASIC19.63■□□□□ 0.73
SHDQ96IW2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHDQ96IW2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHDQ96IW2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SHDQ96IW2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.62■□□□□ 0.73
SHDQ96IW2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHDQ96IW2 KRT8P41-201ENST00000533985 1514 ntBASIC19.62■□□□□ 0.73
SHDQ96IW2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHDQ96IW2 AC004870.1-201ENST00000315132 882 ntBASIC19.62■□□□□ 0.73
SHDQ96IW2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHDQ96IW2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.62■□□□□ 0.73
SHDQ96IW2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHDQ96IW2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.62■□□□□ 0.73
SHDQ96IW2 AC111152.3-201ENST00000569699 673 ntBASIC19.62■□□□□ 0.73
SHDQ96IW2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHDQ96IW2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHDQ96IW2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHDQ96IW2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SHDQ96IW2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHDQ96IW2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHDQ96IW2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.62■□□□□ 0.73
SHDQ96IW2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHDQ96IW2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHDQ96IW2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHDQ96IW2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.61■□□□□ 0.73
SHDQ96IW2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.61■□□□□ 0.73
SHDQ96IW2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SHDQ96IW2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.61■□□□□ 0.73
SHDQ96IW2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHDQ96IW2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHDQ96IW2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.61■□□□□ 0.73
SHDQ96IW2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.61■□□□□ 0.73
SHDQ96IW2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHDQ96IW2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.61■□□□□ 0.73
SHDQ96IW2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
SHDQ96IW2 RN7SL510P-201ENST00000581311 263 ntBASIC19.61■□□□□ 0.73
SHDQ96IW2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.61■□□□□ 0.73
SHDQ96IW2 AC092119.3-201ENST00000612618 583 ntBASIC19.61■□□□□ 0.73
SHDQ96IW2 NPAP1P7-201ENST00000613027 823 ntBASIC19.61■□□□□ 0.73
SHDQ96IW2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.61■□□□□ 0.73
SHDQ96IW2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.61■□□□□ 0.73
SHDQ96IW2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHDQ96IW2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.61■□□□□ 0.73
SHDQ96IW2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms