Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2A3Q93084 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2A3Q93084 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2A3Q93084 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP2A3Q93084 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.43■□□□□ 0.86
ATP2A3Q93084 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
ATP2A3Q93084 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 DPP3P2-201ENST00000416030 1696 ntBASIC20.43■□□□□ 0.86
ATP2A3Q93084 NIFKP9-201ENST00000419265 221 ntBASIC20.43■□□□□ 0.86
ATP2A3Q93084 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.43■□□□□ 0.86
ATP2A3Q93084 KSR1P1-201ENST00000446298 240 ntBASIC20.43■□□□□ 0.86
ATP2A3Q93084 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.43■□□□□ 0.86
ATP2A3Q93084 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.43■□□□□ 0.86
ATP2A3Q93084 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.43■□□□□ 0.86
ATP2A3Q93084 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.43■□□□□ 0.86
ATP2A3Q93084 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.43■□□□□ 0.86
ATP2A3Q93084 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.43■□□□□ 0.86
ATP2A3Q93084 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 AC007952.6-201ENST00000573168 2673 ntBASIC20.43■□□□□ 0.86
ATP2A3Q93084 AC003957.1-201ENST00000625108 2673 ntBASIC20.43■□□□□ 0.86
ATP2A3Q93084 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 AC099778.1-201ENST00000568593 1911 ntBASIC20.43■□□□□ 0.86
ATP2A3Q93084 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.43■□□□□ 0.86
ATP2A3Q93084 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP2A3Q93084 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 SMG8-203ENST00000578922 2178 ntBASIC20.42■□□□□ 0.86
ATP2A3Q93084 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 UNC93B2-201ENST00000285383 730 ntBASIC20.42■□□□□ 0.86
ATP2A3Q93084 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP2A3Q93084 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.42■□□□□ 0.86
ATP2A3Q93084 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 KRT16P6-202ENST00000425692 1426 ntBASIC20.41■□□□□ 0.86
ATP2A3Q93084 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 AP006587.1-201ENST00000534129 1502 ntBASIC20.41■□□□□ 0.86
ATP2A3Q93084 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.41■□□□□ 0.86
ATP2A3Q93084 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP2A3Q93084 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATP2A3Q93084 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 KRT16P1-201ENST00000399124 1418 ntBASIC20.4■□□□□ 0.86
ATP2A3Q93084 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms