Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AC004980.1-204ENST00000429707 299 ntBASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 AL137013.1-201ENST00000432946 1228 ntBASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 AC011506.1-201ENST00000474329 610 ntBASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V0A1Q93050 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 TERF1P1-201ENST00000311003 1181 ntBASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 ARMC10P1-201ENST00000313754 855 ntBASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 SLC25A3P1-201ENST00000443844 931 ntBASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 AL590326.2-201ENST00000625139 305 ntBASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.74■■□□□ 1.07
ATP6V0A1Q93050 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 DGCR10-201ENST00000609839 495 ntBASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V0A1Q93050 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 AC097488.1-201ENST00000507834 756 ntBASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 C2orf69P3-201ENST00000565542 1120 ntBASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 AP005242.2-201ENST00000580065 1175 ntBASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms