Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCG3Q8WXD2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCG3Q8WXD2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 AP001271.2-201ENST00000624018 1556 ntBASIC19.84■□□□□ 0.77
SCG3Q8WXD2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.84■□□□□ 0.77
SCG3Q8WXD2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 AC120498.8-201ENST00000614275 531 ntBASIC19.83■□□□□ 0.77
SCG3Q8WXD2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
SCG3Q8WXD2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.83■□□□□ 0.76
SCG3Q8WXD2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCG3Q8WXD2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCG3Q8WXD2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
SCG3Q8WXD2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
SCG3Q8WXD2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms