Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.95■■□□□ 1.42
RTL9Q8NET4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RTL9Q8NET4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTL9Q8NET4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTL9Q8NET4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTL9Q8NET4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
RTL9Q8NET4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RTL9Q8NET4 TSPY17P-201ENST00000450329 467 ntBASIC23.94■■□□□ 1.42
RTL9Q8NET4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RTL9Q8NET4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RTL9Q8NET4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
RTL9Q8NET4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTL9Q8NET4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTL9Q8NET4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTL9Q8NET4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RTL9Q8NET4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RTL9Q8NET4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTL9Q8NET4 TCF3P1-201ENST00000423021 1937 ntBASIC23.93■■□□□ 1.42
RTL9Q8NET4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.93■■□□□ 1.42
RTL9Q8NET4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.93■■□□□ 1.42
RTL9Q8NET4 ATP5G1P1-201ENST00000448724 379 ntBASIC23.93■■□□□ 1.42
RTL9Q8NET4 AL353719.1-201ENST00000566847 864 ntBASIC23.93■■□□□ 1.42
RTL9Q8NET4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.93■■□□□ 1.42
RTL9Q8NET4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RTL9Q8NET4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTL9Q8NET4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTL9Q8NET4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTL9Q8NET4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
RTL9Q8NET4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTL9Q8NET4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RTL9Q8NET4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.93■■□□□ 1.42
RTL9Q8NET4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTL9Q8NET4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RTL9Q8NET4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 BX664615.1-201ENST00000443558 458 ntBASIC23.92■■□□□ 1.42
RTL9Q8NET4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.92■■□□□ 1.42
RTL9Q8NET4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
RTL9Q8NET4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
RTL9Q8NET4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.92■■□□□ 1.42
RTL9Q8NET4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RTL9Q8NET4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RTL9Q8NET4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.92■■□□□ 1.42
RTL9Q8NET4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTL9Q8NET4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.92■■□□□ 1.42
RTL9Q8NET4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTL9Q8NET4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTL9Q8NET4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 PRSS44-201ENST00000515154 1146 ntBASIC23.91■■□□□ 1.42
RTL9Q8NET4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTL9Q8NET4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RTL9Q8NET4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTL9Q8NET4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTL9Q8NET4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTL9Q8NET4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTL9Q8NET4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTL9Q8NET4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTL9Q8NET4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 AC022616.7-201ENST00000525383 220 ntBASIC23.91■■□□□ 1.42
RTL9Q8NET4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.91■■□□□ 1.42
RTL9Q8NET4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTL9Q8NET4 KRT8P11-201ENST00000409686 1436 ntBASIC23.9■■□□□ 1.42
RTL9Q8NET4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.9■■□□□ 1.42
RTL9Q8NET4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
RTL9Q8NET4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.9■■□□□ 1.42
RTL9Q8NET4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTL9Q8NET4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTL9Q8NET4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTL9Q8NET4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTL9Q8NET4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.9■■□□□ 1.42
RTL9Q8NET4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC23.9■■□□□ 1.42
RTL9Q8NET4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC23.9■■□□□ 1.42
RTL9Q8NET4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
RTL9Q8NET4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
RTL9Q8NET4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTL9Q8NET4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.89■■□□□ 1.42
RTL9Q8NET4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.89■■□□□ 1.42
RTL9Q8NET4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RTL9Q8NET4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms