Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC146Q8IYE0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC25.76■■□□□ 1.72
CCDC146Q8IYE0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 AC008550.1-201ENST00000511500 884 ntBASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 AF186192.3-201ENST00000583427 947 ntBASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC146Q8IYE0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 RARRES2P10-201ENST00000564312 460 ntBASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC25.75■■□□□ 1.71
CCDC146Q8IYE0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
CCDC146Q8IYE0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 SDHAP1-207ENST00000440850 2000 ntBASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 RPS2P55-201ENST00000397318 883 ntBASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 AC107956.1-201ENST00000494359 873 ntBASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCDC146Q8IYE0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 ZNF815P-204ENST00000434898 1737 ntBASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 SAPCD2P4-201ENST00000424595 1171 ntBASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 AC104417.2-201ENST00000562989 1793 ntBASIC25.72■■□□□ 1.71
CCDC146Q8IYE0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 AP002982.1-201ENST00000492365 877 ntBASIC25.71■■□□□ 1.71
CCDC146Q8IYE0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms