Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 TMEM179-206ENST00000616017 1645 ntBASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 AP003071.4-201ENST00000562276 1284 ntBASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM48Q8IWZ4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM48Q8IWZ4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 AC073912.3-201ENST00000624414 853 ntBASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TRIM48Q8IWZ4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 AC099778.1-201ENST00000568593 1911 ntBASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 NUDT16P1-203ENST00000513809 620 ntBASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 AL355075.4-201ENST00000554988 638 ntBASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM48Q8IWZ4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM48Q8IWZ4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM48Q8IWZ4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TRIM48Q8IWZ4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM48Q8IWZ4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms