Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC71Q8IV32 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC71Q8IV32 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 AC069544.1-201ENST00000609399 999 ntBASIC18.17■□□□□ 0.5
CCDC71Q8IV32 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC71Q8IV32 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 MIR718-201ENST00000390190 70 ntBASIC18.16■□□□□ 0.5
CCDC71Q8IV32 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC71Q8IV32 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC71Q8IV32 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms