Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 MIR4674-201ENST00000582457 87 ntBASIC24.47■■□□□ 1.51
COL23A1Q86Y22 AL121672.3-201ENST00000608644 468 ntBASIC24.47■■□□□ 1.51
COL23A1Q86Y22 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL23A1Q86Y22 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC24.46■■□□□ 1.51
COL23A1Q86Y22 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL23A1Q86Y22 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL23A1Q86Y22 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL23A1Q86Y22 GAD2-202ENST00000376248 680 ntTSL 5 BASIC24.46■■□□□ 1.51
COL23A1Q86Y22 NUS1P1-201ENST00000446295 882 ntBASIC24.46■■□□□ 1.51
COL23A1Q86Y22 BX276092.5-203ENST00000456199 560 ntBASIC24.46■■□□□ 1.51
COL23A1Q86Y22 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC24.46■■□□□ 1.51
COL23A1Q86Y22 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL23A1Q86Y22 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.46■■□□□ 1.51
COL23A1Q86Y22 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.46■■□□□ 1.51
COL23A1Q86Y22 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL23A1Q86Y22 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
COL23A1Q86Y22 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.45■■□□□ 1.51
COL23A1Q86Y22 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 RASA4DP-201ENST00000460726 1199 ntBASIC24.45■■□□□ 1.5
COL23A1Q86Y22 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COL23A1Q86Y22 AC133561.1-201ENST00000568600 2415 ntBASIC24.44■■□□□ 1.5
COL23A1Q86Y22 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 AC012676.1-201ENST00000574705 1949 ntBASIC24.44■■□□□ 1.5
COL23A1Q86Y22 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 AP002414.4-201ENST00000589764 1148 ntBASIC24.44■■□□□ 1.5
COL23A1Q86Y22 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 AL732292.2-201ENST00000609649 430 ntBASIC24.44■■□□□ 1.5
COL23A1Q86Y22 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL23A1Q86Y22 KRT8P11-201ENST00000409686 1436 ntBASIC24.44■■□□□ 1.5
COL23A1Q86Y22 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 AC079781.3-201ENST00000449110 356 ntBASIC24.43■■□□□ 1.5
COL23A1Q86Y22 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 AL160237.2-201ENST00000556165 472 ntBASIC24.43■■□□□ 1.5
COL23A1Q86Y22 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL23A1Q86Y22 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 FBXW4P1-201ENST00000426721 2239 ntBASIC24.42■■□□□ 1.5
COL23A1Q86Y22 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 TSPY19P-201ENST00000418461 509 ntBASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms