Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTL4Q6ZR62 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RTL4Q6ZR62 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 AL135905.2-201ENST00000584934 1404 ntBASIC18.18■□□□□ 0.5
RTL4Q6ZR62 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTL4Q6ZR62 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 TMEM179-206ENST00000616017 1645 ntBASIC18.17■□□□□ 0.5
RTL4Q6ZR62 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 KRT16P5-201ENST00000455284 522 ntBASIC18.17■□□□□ 0.5
RTL4Q6ZR62 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 AC004264.1-201ENST00000608354 794 ntBASIC18.17■□□□□ 0.5
RTL4Q6ZR62 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 BX119927.1-201ENST00000636596 1552 ntBASIC18.17■□□□□ 0.5
RTL4Q6ZR62 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.17■□□□□ 0.5
RTL4Q6ZR62 AL691432.2-201ENST00000607222 2038 ntBASIC18.16■□□□□ 0.5
RTL4Q6ZR62 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 AC012618.2-201ENST00000428058 849 ntBASIC18.16■□□□□ 0.5
RTL4Q6ZR62 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTL4Q6ZR62 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms