Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PPP4R4Q6NUP7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PPP4R4Q6NUP7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PPP4R4Q6NUP7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PPP4R4Q6NUP7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.58■□□□□ 0.57
PPP4R4Q6NUP7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
PPP4R4Q6NUP7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PPP4R4Q6NUP7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.58■□□□□ 0.57
PPP4R4Q6NUP7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PPP4R4Q6NUP7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 CDV3P1-201ENST00000471403 739 ntBASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 AC083906.2-201ENST00000511578 360 ntBASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 AF201337.1-201ENST00000520239 748 ntBASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 AC016405.3-201ENST00000607710 860 ntBASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PPP4R4Q6NUP7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 AC120498.9-201ENST00000339021 3867 ntBASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PPP4R4Q6NUP7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 AC005332.8-201ENST00000622750 2735 ntBASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 AC116050.2-201ENST00000612102 1779 ntBASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 AC007322.4-201ENST00000509611 723 ntBASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 AC243732.1-201ENST00000612648 864 ntBASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PPP4R4Q6NUP7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 AC009237.14-201ENST00000609975 1594 ntBASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 NCF1B-203ENST00000435988 1254 ntBASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 AC104771.1-201ENST00000603335 964 ntBASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PPP4R4Q6NUP7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms