Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 AC140113.3-201ENST00000605663 199 ntBASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 CA15P1-201ENST00000481698 905 ntBASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 AL136038.3-201ENST00000561909 1096 ntBASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13DQ5THJ4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 FDX1P1-201ENST00000449115 551 ntBASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 RN7SL510P-201ENST00000581311 263 ntBASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 AC004263.2-201ENST00000617183 678 ntBASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 AC069148.1-201ENST00000608741 768 ntBASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13DQ5THJ4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 AC012676.1-201ENST00000574705 1949 ntBASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 STARP1-201ENST00000397973 869 ntBASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 AL512408.1-201ENST00000569378 2000 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms