Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM259Q4ZIN3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM259Q4ZIN3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM259Q4ZIN3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM259Q4ZIN3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM259Q4ZIN3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM259Q4ZIN3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM259Q4ZIN3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM259Q4ZIN3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 BX088651.1-201ENST00000540551 451 ntBASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 AL353708.3-201ENST00000610272 989 ntBASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM259Q4ZIN3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 BX323043.1-201ENST00000641006 1765 ntBASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM259Q4ZIN3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 TFP1-202ENST00000475455 1573 ntBASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 TSPY15P-201ENST00000457163 923 ntBASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 CD177P1-201ENST00000606252 935 ntBASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 AC073195.1-201ENST00000607241 877 ntBASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 AC026471.5-201ENST00000615068 467 ntBASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 SMG8-203ENST00000578922 2178 ntBASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM259Q4ZIN3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM259Q4ZIN3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms