Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.47■□□□□ 0.87
PTPN20Q4JDL3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 LINC01465-201ENST00000408887 1940 ntBASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 SDHAP1-207ENST00000440850 2000 ntBASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PTPN20Q4JDL3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 HLA-A-209ENST00000638375 975 ntBASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PTPN20Q4JDL3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.44■□□□□ 0.86
PTPN20Q4JDL3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN20Q4JDL3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN20Q4JDL3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms