Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ECEL1P2-202ENST00000465689 757 ntBASIC23.34■■□□□ 1.33
PDS5AQ29RF7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.34■■□□□ 1.33
PDS5AQ29RF7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 ZNF815P-204ENST00000434898 1737 ntBASIC23.34■■□□□ 1.33
PDS5AQ29RF7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.33■■□□□ 1.33
PDS5AQ29RF7 HMGA1P5-201ENST00000412453 271 ntBASIC23.33■■□□□ 1.33
PDS5AQ29RF7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 AC010203.1-204ENST00000548782 407 ntBASIC23.33■■□□□ 1.33
PDS5AQ29RF7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDS5AQ29RF7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDS5AQ29RF7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
PDS5AQ29RF7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDS5AQ29RF7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDS5AQ29RF7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
PDS5AQ29RF7 KRT8P11-201ENST00000409686 1436 ntBASIC23.32■■□□□ 1.32
PDS5AQ29RF7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.32■■□□□ 1.32
PDS5AQ29RF7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 AC007663.1-201ENST00000438948 1240 ntBASIC23.32■■□□□ 1.32
PDS5AQ29RF7 TSPY17P-201ENST00000450329 467 ntBASIC23.32■■□□□ 1.32
PDS5AQ29RF7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC23.32■■□□□ 1.32
PDS5AQ29RF7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 KRT18P57-201ENST00000443599 1254 ntBASIC23.31■■□□□ 1.32
PDS5AQ29RF7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.31■■□□□ 1.32
PDS5AQ29RF7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.3■■□□□ 1.32
PDS5AQ29RF7 AL353719.1-201ENST00000566847 864 ntBASIC23.3■■□□□ 1.32
PDS5AQ29RF7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDS5AQ29RF7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms