Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDR2Q01850 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDR2Q01850 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 AC098818.2-201ENST00000564925 2320 ntBASIC20.69■□□□□ 0.9
CDR2Q01850 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.69■□□□□ 0.9
CDR2Q01850 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.69■□□□□ 0.9
CDR2Q01850 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.69■□□□□ 0.9
CDR2Q01850 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.69■□□□□ 0.9
CDR2Q01850 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.69■□□□□ 0.9
CDR2Q01850 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.69■□□□□ 0.9
CDR2Q01850 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDR2Q01850 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDR2Q01850 AP000974.1-201ENST00000623909 2387 ntBASIC20.68■□□□□ 0.9
CDR2Q01850 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDR2Q01850 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.68■□□□□ 0.9
CDR2Q01850 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.68■□□□□ 0.9
CDR2Q01850 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.68■□□□□ 0.9
CDR2Q01850 TUBB8P6-201ENST00000436895 1288 ntBASIC20.68■□□□□ 0.9
CDR2Q01850 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
CDR2Q01850 AP003097.1-201ENST00000530657 1135 ntBASIC20.68■□□□□ 0.9
CDR2Q01850 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.68■□□□□ 0.9
CDR2Q01850 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.68■□□□□ 0.9
CDR2Q01850 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.68■□□□□ 0.9
CDR2Q01850 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.68■□□□□ 0.9
CDR2Q01850 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.68■□□□□ 0.9
CDR2Q01850 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.68■□□□□ 0.9
CDR2Q01850 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDR2Q01850 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDR2Q01850 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR2Q01850 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDR2Q01850 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDR2Q01850 AC104417.2-201ENST00000562989 1793 ntBASIC20.67■□□□□ 0.9
CDR2Q01850 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.67■□□□□ 0.9
CDR2Q01850 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.67■□□□□ 0.9
CDR2Q01850 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR2Q01850 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDR2Q01850 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR2Q01850 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDR2Q01850 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDR2Q01850 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDR2Q01850 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.67■□□□□ 0.9
CDR2Q01850 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
CDR2Q01850 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.67■□□□□ 0.9
CDR2Q01850 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.67■□□□□ 0.9
CDR2Q01850 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.67■□□□□ 0.9
CDR2Q01850 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDR2Q01850 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CDR2Q01850 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.67■□□□□ 0.9
CDR2Q01850 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CDR2Q01850 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CDR2Q01850 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.66■□□□□ 0.9
CDR2Q01850 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.66■□□□□ 0.9
CDR2Q01850 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.66■□□□□ 0.9
CDR2Q01850 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDR2Q01850 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.66■□□□□ 0.9
CDR2Q01850 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDR2Q01850 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.66■□□□□ 0.9
CDR2Q01850 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 AC026366.1-201ENST00000488803 879 ntBASIC20.66■□□□□ 0.9
CDR2Q01850 KRT18P6-201ENST00000555540 1265 ntBASIC20.66■□□□□ 0.9
CDR2Q01850 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.66■□□□□ 0.9
CDR2Q01850 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.66■□□□□ 0.9
CDR2Q01850 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CDR2Q01850 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.66■□□□□ 0.9
CDR2Q01850 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDR2Q01850 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDR2Q01850 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms