Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.57□□□□□ -0.24
CKS1BP61024 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.57□□□□□ -0.24
CKS1BP61024 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS1BP61024 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS1BP61024 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.57□□□□□ -0.24
CKS1BP61024 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS1BP61024 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS1BP61024 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.57□□□□□ -0.24
CKS1BP61024 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CKS1BP61024 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS1BP61024 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS1BP61024 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS1BP61024 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.57□□□□□ -0.24
CKS1BP61024 AC008406.3-201ENST00000620001 1374 ntBASIC13.57□□□□□ -0.24
CKS1BP61024 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
CKS1BP61024 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.56□□□□□ -0.24
CKS1BP61024 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.56□□□□□ -0.24
CKS1BP61024 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CKS1BP61024 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CKS1BP61024 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.56□□□□□ -0.24
CKS1BP61024 AC093503.3-201ENST00000624917 2352 ntBASIC13.56□□□□□ -0.24
CKS1BP61024 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.56□□□□□ -0.24
CKS1BP61024 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 AL596257.1-201ENST00000641463 2694 ntBASIC13.56□□□□□ -0.24
CKS1BP61024 EDA-201ENST00000338901 1233 ntBASIC13.56□□□□□ -0.24
CKS1BP61024 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.56□□□□□ -0.24
CKS1BP61024 AC079140.4-201ENST00000507448 529 ntBASIC13.56□□□□□ -0.24
CKS1BP61024 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.56□□□□□ -0.24
CKS1BP61024 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
CKS1BP61024 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.56□□□□□ -0.24
CKS1BP61024 AC131212.1-201ENST00000613771 668 ntBASIC13.56□□□□□ -0.24
CKS1BP61024 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.56□□□□□ -0.24
CKS1BP61024 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.56□□□□□ -0.24
CKS1BP61024 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CKS1BP61024 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.56□□□□□ -0.24
CKS1BP61024 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.56□□□□□ -0.24
CKS1BP61024 RASA4CP-201ENST00000424092 1398 ntBASIC13.56□□□□□ -0.24
CKS1BP61024 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CKS1BP61024 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS1BP61024 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.55□□□□□ -0.24
CKS1BP61024 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CKS1BP61024 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CKS1BP61024 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.55□□□□□ -0.24
CKS1BP61024 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CKS1BP61024 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CKS1BP61024 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.55□□□□□ -0.24
CKS1BP61024 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CKS1BP61024 AC096631.2-201ENST00000436136 790 ntBASIC13.55□□□□□ -0.24
CKS1BP61024 AL354811.1-201ENST00000610286 706 ntBASIC13.55□□□□□ -0.24
CKS1BP61024 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.55□□□□□ -0.24
CKS1BP61024 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CKS1BP61024 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.55□□□□□ -0.24
CKS1BP61024 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 KRT16P2-201ENST00000414673 1423 ntBASIC13.55□□□□□ -0.24
CKS1BP61024 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CKS1BP61024 KRT87P-202ENST00000534226 1464 ntBASIC13.55□□□□□ -0.24
CKS1BP61024 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CKS1BP61024 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CKS1BP61024 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.54□□□□□ -0.24
CKS1BP61024 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.54□□□□□ -0.24
CKS1BP61024 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.54□□□□□ -0.24
CKS1BP61024 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms