Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CLDN6P56747 AL023803.3-201ENST00000615559 522 ntBASIC18.68■□□□□ 0.58
CLDN6P56747 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN6P56747 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.68■□□□□ 0.58
CLDN6P56747 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN6P56747 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN6P56747 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.68■□□□□ 0.58
CLDN6P56747 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN6P56747 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CLDN6P56747 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN6P56747 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN6P56747 AC005332.1-201ENST00000577698 1310 ntBASIC18.68■□□□□ 0.58
CLDN6P56747 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN6P56747 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLDN6P56747 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN6P56747 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLDN6P56747 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN6P56747 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN6P56747 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN6P56747 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN6P56747 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN6P56747 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN6P56747 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN6P56747 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN6P56747 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CLDN6P56747 AL450487.1-201ENST00000426799 995 ntBASIC18.67■□□□□ 0.58
CLDN6P56747 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN6P56747 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN6P56747 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN6P56747 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN6P56747 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.67■□□□□ 0.58
CLDN6P56747 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.67■□□□□ 0.58
CLDN6P56747 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN6P56747 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CLDN6P56747 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN6P56747 AC010653.2-201ENST00000623505 997 ntBASIC18.67■□□□□ 0.58
CLDN6P56747 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN6P56747 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLDN6P56747 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN6P56747 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CLDN6P56747 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN6P56747 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN6P56747 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN6P56747 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN6P56747 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN6P56747 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN6P56747 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.66■□□□□ 0.58
CLDN6P56747 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN6P56747 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.66■□□□□ 0.58
CLDN6P56747 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.66■□□□□ 0.58
CLDN6P56747 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLDN6P56747 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN6P56747 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN6P56747 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN6P56747 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.66■□□□□ 0.58
CLDN6P56747 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN6P56747 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN6P56747 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLDN6P56747 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN6P56747 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN6P56747 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN6P56747 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN6P56747 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN6P56747 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLDN6P56747 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CLDN6P56747 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN6P56747 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN6P56747 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN6P56747 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN6P56747 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN6P56747 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN6P56747 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN6P56747 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CLDN6P56747 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLDN6P56747 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN6P56747 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN6P56747 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN6P56747 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN6P56747 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN6P56747 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN6P56747 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CLDN6P56747 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLDN6P56747 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN6P56747 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLDN6P56747 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN6P56747 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN6P56747 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN6P56747 AC140113.3-201ENST00000605663 199 ntBASIC18.64■□□□□ 0.57
CLDN6P56747 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.64■□□□□ 0.57
CLDN6P56747 AC007225.1-201ENST00000566331 1836 ntBASIC18.64■□□□□ 0.57
CLDN6P56747 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLDN6P56747 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN6P56747 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN6P56747 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN6P56747 TMEM179-206ENST00000616017 1645 ntBASIC18.63■□□□□ 0.57
CLDN6P56747 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN6P56747 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CLDN6P56747 AC006128.1-201ENST00000624704 1661 ntBASIC18.63■□□□□ 0.57
CLDN6P56747 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN6P56747 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms