Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 REXO1L12P-201ENST00000622156 912 ntBASIC20.59■□□□□ 0.89
CACNA2D1P54289 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 KRT16P1-201ENST00000399124 1418 ntBASIC20.59■□□□□ 0.89
CACNA2D1P54289 KRT8P8-201ENST00000434750 1448 ntBASIC20.59■□□□□ 0.89
CACNA2D1P54289 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 LINC01465-201ENST00000408887 1940 ntBASIC20.59■□□□□ 0.89
CACNA2D1P54289 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CACNA2D1P54289 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CACNA2D1P54289 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.58■□□□□ 0.89
CACNA2D1P54289 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 KRT17P2-201ENST00000300992 1314 ntBASIC20.58■□□□□ 0.89
CACNA2D1P54289 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.58■□□□□ 0.89
CACNA2D1P54289 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CACNA2D1P54289 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.58■□□□□ 0.89
CACNA2D1P54289 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.58■□□□□ 0.89
CACNA2D1P54289 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CACNA2D1P54289 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
CACNA2D1P54289 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.58■□□□□ 0.89
CACNA2D1P54289 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.58■□□□□ 0.89
CACNA2D1P54289 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 AL355355.2-201ENST00000442321 338 ntBASIC20.58■□□□□ 0.89
CACNA2D1P54289 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.58■□□□□ 0.89
CACNA2D1P54289 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.58■□□□□ 0.89
CACNA2D1P54289 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CACNA2D1P54289 AL445675.2-201ENST00000620291 557 ntBASIC20.58■□□□□ 0.89
CACNA2D1P54289 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.58■□□□□ 0.88
CACNA2D1P54289 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CACNA2D1P54289 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CACNA2D1P54289 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.58■□□□□ 0.88
CACNA2D1P54289 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
CACNA2D1P54289 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CACNA2D1P54289 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CACNA2D1P54289 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.58■□□□□ 0.88
CACNA2D1P54289 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CACNA2D1P54289 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 AC004980.1-204ENST00000429707 299 ntBASIC20.57■□□□□ 0.88
CACNA2D1P54289 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.57■□□□□ 0.88
CACNA2D1P54289 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 BX088651.1-201ENST00000540551 451 ntBASIC20.57■□□□□ 0.88
CACNA2D1P54289 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 AC125437.2-201ENST00000625180 2167 ntBASIC20.57■□□□□ 0.88
CACNA2D1P54289 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CACNA2D1P54289 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CACNA2D1P54289 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA2D1P54289 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA2D1P54289 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA2D1P54289 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA2D1P54289 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA2D1P54289 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA2D1P54289 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA2D1P54289 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 MESTP1-201ENST00000404287 994 ntBASIC20.56■□□□□ 0.88
CACNA2D1P54289 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNA2D1P54289 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNA2D1P54289 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms