Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC25A1P53007 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SLC25A1P53007 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 AC104417.2-201ENST00000562989 1793 ntBASIC17.26■□□□□ 0.35
SLC25A1P53007 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC25A1P53007 AC006970.2-201ENST00000450065 779 ntBASIC17.26■□□□□ 0.35
SLC25A1P53007 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC25A1P53007 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC25A1P53007 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC25A1P53007 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC25A1P53007 HLA-B-256ENST00000639848 1089 ntBASIC17.26■□□□□ 0.35
SLC25A1P53007 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC25A1P53007 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SLC25A1P53007 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SLC25A1P53007 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC25A1P53007 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC25A1P53007 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SLC25A1P53007 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC25A1P53007 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SLC25A1P53007 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SLC25A1P53007 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLC25A1P53007 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC25A1P53007 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC25A1P53007 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC25A1P53007 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC25A1P53007 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC25A1P53007 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC25A1P53007 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC25A1P53007 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC25A1P53007 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SLC25A1P53007 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC25A1P53007 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC25A1P53007 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC25A1P53007 SLC29A4P1-201ENST00000398760 971 ntBASIC17.24■□□□□ 0.35
SLC25A1P53007 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC25A1P53007 GUSBP6-202ENST00000438529 1198 ntBASIC17.24■□□□□ 0.35
SLC25A1P53007 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC25A1P53007 MIR4758-201ENST00000577688 71 ntBASIC17.24■□□□□ 0.35
SLC25A1P53007 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC25A1P53007 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC25A1P53007 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC25A1P53007 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC25A1P53007 AC092368.3-202ENST00000574180 1591 ntBASIC17.23■□□□□ 0.35
SLC25A1P53007 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SLC25A1P53007 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.23■□□□□ 0.35
SLC25A1P53007 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SLC25A1P53007 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC25A1P53007 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC25A1P53007 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.23■□□□□ 0.35
SLC25A1P53007 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC25A1P53007 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.23■□□□□ 0.35
SLC25A1P53007 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.23■□□□□ 0.35
SLC25A1P53007 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC25A1P53007 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 MYC-209ENST00000641252 345 ntBASIC17.23■□□□□ 0.35
SLC25A1P53007 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 AC006333.2-201ENST00000607957 2099 ntBASIC17.23■□□□□ 0.35
SLC25A1P53007 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC25A1P53007 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC25A1P53007 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms