Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.61■□□□□ 0.89
SSR1P43307 GUSBP6-202ENST00000438529 1198 ntBASIC20.61■□□□□ 0.89
SSR1P43307 AC097658.1-201ENST00000475555 843 ntBASIC20.61■□□□□ 0.89
SSR1P43307 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.61■□□□□ 0.89
SSR1P43307 AC005829.2-201ENST00000571422 1056 ntBASIC20.61■□□□□ 0.89
SSR1P43307 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.61■□□□□ 0.89
SSR1P43307 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.61■□□□□ 0.89
SSR1P43307 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SSR1P43307 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
SSR1P43307 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SSR1P43307 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
SSR1P43307 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.61■□□□□ 0.89
SSR1P43307 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SSR1P43307 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SSR1P43307 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.61■□□□□ 0.89
SSR1P43307 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR1P43307 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR1P43307 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR1P43307 AC005332.7-201ENST00000614046 2005 ntBASIC20.6■□□□□ 0.89
SSR1P43307 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR1P43307 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR1P43307 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR1P43307 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR1P43307 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.6■□□□□ 0.89
SSR1P43307 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SSR1P43307 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.6■□□□□ 0.89
SSR1P43307 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.6■□□□□ 0.89
SSR1P43307 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.6■□□□□ 0.89
SSR1P43307 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.6■□□□□ 0.89
SSR1P43307 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.6■□□□□ 0.89
SSR1P43307 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SSR1P43307 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR1P43307 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
SSR1P43307 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SSR1P43307 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR1P43307 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR1P43307 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.59■□□□□ 0.89
SSR1P43307 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR1P43307 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SSR1P43307 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SSR1P43307 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.59■□□□□ 0.89
SSR1P43307 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR1P43307 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.59■□□□□ 0.89
SSR1P43307 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SSR1P43307 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.59■□□□□ 0.89
SSR1P43307 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SSR1P43307 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR1P43307 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SSR1P43307 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR1P43307 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSR1P43307 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.59■□□□□ 0.89
SSR1P43307 AC116351.2-201ENST00000606540 1585 ntBASIC20.59■□□□□ 0.89
SSR1P43307 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR1P43307 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SSR1P43307 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR1P43307 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSR1P43307 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SSR1P43307 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSR1P43307 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SSR1P43307 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.58■□□□□ 0.89
SSR1P43307 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
SSR1P43307 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSR1P43307 AC124283.5-201ENST00000624661 1809 ntBASIC20.58■□□□□ 0.89
SSR1P43307 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSR1P43307 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SSR1P43307 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.58■□□□□ 0.89
SSR1P43307 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.58■□□□□ 0.89
SSR1P43307 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSR1P43307 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSR1P43307 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.58■□□□□ 0.89
SSR1P43307 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.58■□□□□ 0.89
SSR1P43307 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.58■□□□□ 0.89
SSR1P43307 AL138781.1-201ENST00000566567 1274 ntBASIC20.58■□□□□ 0.89
SSR1P43307 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
SSR1P43307 AL109923.1-201ENST00000618799 583 ntBASIC20.58■□□□□ 0.89
SSR1P43307 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSR1P43307 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SSR1P43307 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.58■□□□□ 0.88
SSR1P43307 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.58■□□□□ 0.88
SSR1P43307 AC092368.3-202ENST00000574180 1591 ntBASIC20.58■□□□□ 0.88
SSR1P43307 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.58■□□□□ 0.88
SSR1P43307 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SSR1P43307 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SSR1P43307 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SSR1P43307 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SSR1P43307 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.57■□□□□ 0.88
SSR1P43307 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR1P43307 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms