Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.37■□□□□ 0.69
HMGCLP35914 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGCLP35914 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGCLP35914 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HMGCLP35914 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGCLP35914 AF186192.3-201ENST00000583427 947 ntBASIC19.37■□□□□ 0.69
HMGCLP35914 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HMGCLP35914 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HMGCLP35914 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGCLP35914 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGCLP35914 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLP35914 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HMGCLP35914 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCLP35914 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLP35914 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGCLP35914 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCLP35914 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLP35914 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGCLP35914 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLP35914 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HMGCLP35914 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLP35914 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLP35914 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCLP35914 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGCLP35914 AP002982.1-201ENST00000492365 877 ntBASIC19.36■□□□□ 0.69
HMGCLP35914 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.36■□□□□ 0.69
HMGCLP35914 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGCLP35914 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCLP35914 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.36■□□□□ 0.69
HMGCLP35914 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.36■□□□□ 0.69
HMGCLP35914 AL445675.2-201ENST00000620291 557 ntBASIC19.36■□□□□ 0.69
HMGCLP35914 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.36■□□□□ 0.69
HMGCLP35914 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLP35914 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGCLP35914 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLP35914 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HMGCLP35914 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HMGCLP35914 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGCLP35914 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
HMGCLP35914 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGCLP35914 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGCLP35914 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HMGCLP35914 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 KSR1P1-201ENST00000446298 240 ntBASIC19.35■□□□□ 0.69
HMGCLP35914 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HMGCLP35914 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.35■□□□□ 0.69
HMGCLP35914 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.35■□□□□ 0.69
HMGCLP35914 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
HMGCLP35914 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGCLP35914 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGCLP35914 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCLP35914 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGCLP35914 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCLP35914 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGCLP35914 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HMGCLP35914 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.34■□□□□ 0.69
HMGCLP35914 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.34■□□□□ 0.69
HMGCLP35914 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.34■□□□□ 0.69
HMGCLP35914 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.34■□□□□ 0.69
HMGCLP35914 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGCLP35914 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCLP35914 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLP35914 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLP35914 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLP35914 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCLP35914 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCLP35914 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HMGCLP35914 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
HMGCLP35914 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.33■□□□□ 0.69
HMGCLP35914 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCLP35914 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCLP35914 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.33■□□□□ 0.69
HMGCLP35914 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.33■□□□□ 0.69
HMGCLP35914 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HMGCLP35914 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCLP35914 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
HMGCLP35914 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCLP35914 RPS2P55-201ENST00000397318 883 ntBASIC19.33■□□□□ 0.68
HMGCLP35914 AC012618.2-201ENST00000428058 849 ntBASIC19.33■□□□□ 0.68
HMGCLP35914 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.33■□□□□ 0.68
HMGCLP35914 AC107956.1-201ENST00000494359 873 ntBASIC19.33■□□□□ 0.68
HMGCLP35914 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms