Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL441883.1-201ENST00000566170 1045 ntBASIC21.27■■□□□ 1
HOXC8P31273 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.27■■□□□ 1
HOXC8P31273 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.27■■□□□ 1
HOXC8P31273 AC008622.2-201ENST00000617006 1229 ntBASIC21.27■■□□□ 1
HOXC8P31273 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.27■■□□□ 1
HOXC8P31273 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC8P31273 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.27■■□□□ 1
HOXC8P31273 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HOXC8P31273 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.26■□□□□ 0.99
HOXC8P31273 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC8P31273 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.26■□□□□ 0.99
HOXC8P31273 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.26■□□□□ 0.99
HOXC8P31273 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC8P31273 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HOXC8P31273 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HOXC8P31273 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.26■□□□□ 0.99
HOXC8P31273 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.26■□□□□ 0.99
HOXC8P31273 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC8P31273 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HOXC8P31273 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.25■□□□□ 0.99
HOXC8P31273 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC8P31273 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC8P31273 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC8P31273 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC8P31273 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
HOXC8P31273 KRT8P45-201ENST00000414328 1447 ntBASIC21.25■□□□□ 0.99
HOXC8P31273 HOMER2P1-201ENST00000455653 964 ntBASIC21.25■□□□□ 0.99
HOXC8P31273 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC8P31273 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC8P31273 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC8P31273 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.25■□□□□ 0.99
HOXC8P31273 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HOXC8P31273 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
HOXC8P31273 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.25■□□□□ 0.99
HOXC8P31273 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.24■□□□□ 0.99
HOXC8P31273 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC8P31273 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC8P31273 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC8P31273 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.24■□□□□ 0.99
HOXC8P31273 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC8P31273 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.24■□□□□ 0.99
HOXC8P31273 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.24■□□□□ 0.99
HOXC8P31273 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.24■□□□□ 0.99
HOXC8P31273 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC8P31273 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.24■□□□□ 0.99
HOXC8P31273 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.24■□□□□ 0.99
HOXC8P31273 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.24■□□□□ 0.99
HOXC8P31273 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.24■□□□□ 0.99
HOXC8P31273 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC8P31273 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.24■□□□□ 0.99
HOXC8P31273 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.24■□□□□ 0.99
HOXC8P31273 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
HOXC8P31273 AL121956.5-201ENST00000625261 221 ntBASIC21.24■□□□□ 0.99
HOXC8P31273 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.24■□□□□ 0.99
HOXC8P31273 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC8P31273 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC8P31273 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HOXC8P31273 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
HOXC8P31273 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC8P31273 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC8P31273 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HOXC8P31273 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HOXC8P31273 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC8P31273 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.23■□□□□ 0.99
HOXC8P31273 AL137060.1-201ENST00000618151 2648 ntBASIC21.23■□□□□ 0.99
HOXC8P31273 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.23■□□□□ 0.99
HOXC8P31273 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC8P31273 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC8P31273 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.23■□□□□ 0.99
HOXC8P31273 FAM86EP-206ENST00000510506 987 ntBASIC21.23■□□□□ 0.99
HOXC8P31273 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.23■□□□□ 0.99
HOXC8P31273 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.23■□□□□ 0.99
HOXC8P31273 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.23■□□□□ 0.99
HOXC8P31273 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC8P31273 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
HOXC8P31273 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.23■□□□□ 0.99
HOXC8P31273 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HOXC8P31273 AC099778.1-201ENST00000568593 1911 ntBASIC21.23■□□□□ 0.99
HOXC8P31273 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HOXC8P31273 AL391422.3-201ENST00000603791 2761 ntBASIC21.23■□□□□ 0.99
HOXC8P31273 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HOXC8P31273 AC104417.2-201ENST00000562989 1793 ntBASIC21.23■□□□□ 0.99
HOXC8P31273 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC8P31273 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC8P31273 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.22■□□□□ 0.99
HOXC8P31273 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC8P31273 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC8P31273 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.22■□□□□ 0.99
HOXC8P31273 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC8P31273 AC092647.4-201ENST00000457211 535 ntBASIC21.22■□□□□ 0.99
HOXC8P31273 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC8P31273 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.22■□□□□ 0.99
HOXC8P31273 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.22■□□□□ 0.99
HOXC8P31273 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HOXC8P31273 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.22■□□□□ 0.99
HOXC8P31273 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HOXC8P31273 AL023973.1-201ENST00000624619 620 ntBASIC21.22■□□□□ 0.99
HOXC8P31273 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
HOXC8P31273 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HOXC8P31273 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms