Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA11P31270 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA11P31270 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA11P31270 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA11P31270 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA11P31270 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.05■□□□□ 0.96
HOXA11P31270 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HOXA11P31270 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA11P31270 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA11P31270 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HOXA11P31270 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXA11P31270 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXA11P31270 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXA11P31270 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.05■□□□□ 0.96
HOXA11P31270 KRT18P57-201ENST00000443599 1254 ntBASIC21.05■□□□□ 0.96
HOXA11P31270 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.05■□□□□ 0.96
HOXA11P31270 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.05■□□□□ 0.96
HOXA11P31270 AC010203.1-204ENST00000548782 407 ntBASIC21.05■□□□□ 0.96
HOXA11P31270 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXA11P31270 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
HOXA11P31270 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.05■□□□□ 0.96
HOXA11P31270 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HOXA11P31270 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HOXA11P31270 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA11P31270 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.04■□□□□ 0.96
HOXA11P31270 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA11P31270 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA11P31270 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA11P31270 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA11P31270 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA11P31270 AL137013.1-201ENST00000432946 1228 ntBASIC21.04■□□□□ 0.96
HOXA11P31270 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA11P31270 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA11P31270 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA11P31270 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA11P31270 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA11P31270 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HOXA11P31270 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA11P31270 AC104417.2-201ENST00000562989 1793 ntBASIC21.04■□□□□ 0.96
HOXA11P31270 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HOXA11P31270 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA11P31270 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA11P31270 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA11P31270 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA11P31270 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA11P31270 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXA11P31270 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.03■□□□□ 0.96
HOXA11P31270 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.03■□□□□ 0.96
HOXA11P31270 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXA11P31270 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXA11P31270 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
HOXA11P31270 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.03■□□□□ 0.96
HOXA11P31270 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.03■□□□□ 0.96
HOXA11P31270 AL023803.3-201ENST00000615559 522 ntBASIC21.03■□□□□ 0.96
HOXA11P31270 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.03■□□□□ 0.96
HOXA11P31270 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.03■□□□□ 0.96
HOXA11P31270 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXA11P31270 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
HOXA11P31270 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA11P31270 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXA11P31270 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXA11P31270 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA11P31270 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.02■□□□□ 0.96
HOXA11P31270 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
HOXA11P31270 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA11P31270 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA11P31270 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.02■□□□□ 0.96
HOXA11P31270 SLC25A1P2-201ENST00000430693 912 ntBASIC21.02■□□□□ 0.96
HOXA11P31270 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
HOXA11P31270 CKBP1-201ENST00000565489 1086 ntBASIC21.02■□□□□ 0.96
HOXA11P31270 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.02■□□□□ 0.96
HOXA11P31270 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
HOXA11P31270 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA11P31270 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HOXA11P31270 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA11P31270 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA11P31270 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
HOXA11P31270 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA11P31270 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.02■□□□□ 0.95
HOXA11P31270 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
HOXA11P31270 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
HOXA11P31270 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.02■□□□□ 0.95
HOXA11P31270 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.95
HOXA11P31270 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA11P31270 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HOXA11P31270 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms