Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.9■□□□□ 0.62
EPHA3P29320 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.9■□□□□ 0.62
EPHA3P29320 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.9■□□□□ 0.62
EPHA3P29320 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EPHA3P29320 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.89■□□□□ 0.62
EPHA3P29320 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
EPHA3P29320 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
EPHA3P29320 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.89■□□□□ 0.61
EPHA3P29320 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
EPHA3P29320 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 CYP2T1P-201ENST00000432607 1285 ntBASIC18.89■□□□□ 0.61
EPHA3P29320 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.89■□□□□ 0.61
EPHA3P29320 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.89■□□□□ 0.61
EPHA3P29320 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.89■□□□□ 0.61
EPHA3P29320 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.89■□□□□ 0.61
EPHA3P29320 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.89■□□□□ 0.61
EPHA3P29320 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
EPHA3P29320 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.89■□□□□ 0.61
EPHA3P29320 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EPHA3P29320 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
EPHA3P29320 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
EPHA3P29320 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.88■□□□□ 0.61
EPHA3P29320 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
EPHA3P29320 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
EPHA3P29320 AC069236.1-201ENST00000604339 616 ntBASIC18.88■□□□□ 0.61
EPHA3P29320 AL589743.5-201ENST00000616611 1050 ntBASIC18.88■□□□□ 0.61
EPHA3P29320 AC011767.1-201ENST00000617410 1153 ntBASIC18.88■□□□□ 0.61
EPHA3P29320 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHA3P29320 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
EPHA3P29320 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EPHA3P29320 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.88■□□□□ 0.61
EPHA3P29320 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
EPHA3P29320 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA3P29320 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.87■□□□□ 0.61
EPHA3P29320 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA3P29320 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA3P29320 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EPHA3P29320 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
EPHA3P29320 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
EPHA3P29320 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA3P29320 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA3P29320 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA3P29320 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EPHA3P29320 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.87■□□□□ 0.61
EPHA3P29320 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.87■□□□□ 0.61
EPHA3P29320 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EPHA3P29320 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
EPHA3P29320 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
EPHA3P29320 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA3P29320 AC116351.2-201ENST00000606540 1585 ntBASIC18.87■□□□□ 0.61
EPHA3P29320 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.87■□□□□ 0.61
EPHA3P29320 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EPHA3P29320 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EPHA3P29320 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
EPHA3P29320 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHA3P29320 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.86■□□□□ 0.61
EPHA3P29320 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.86■□□□□ 0.61
EPHA3P29320 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EPHA3P29320 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
EPHA3P29320 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms