Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.16■□□□□ 0.34
MSR1P21757 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.16■□□□□ 0.34
MSR1P21757 AC026366.1-201ENST00000488803 879 ntBASIC17.16■□□□□ 0.34
MSR1P21757 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.16■□□□□ 0.34
MSR1P21757 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.16■□□□□ 0.34
MSR1P21757 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
MSR1P21757 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.16■□□□□ 0.34
MSR1P21757 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.16■□□□□ 0.34
MSR1P21757 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.16■□□□□ 0.34
MSR1P21757 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.16■□□□□ 0.34
MSR1P21757 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.16■□□□□ 0.34
MSR1P21757 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MSR1P21757 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 KRT8P8-201ENST00000434750 1448 ntBASIC17.15■□□□□ 0.34
MSR1P21757 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
MSR1P21757 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.15■□□□□ 0.34
MSR1P21757 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.15■□□□□ 0.34
MSR1P21757 KRT17P3-201ENST00000420566 1262 ntBASIC17.15■□□□□ 0.34
MSR1P21757 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.15■□□□□ 0.34
MSR1P21757 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.15■□□□□ 0.34
MSR1P21757 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MSR1P21757 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.15■□□□□ 0.34
MSR1P21757 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MSR1P21757 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
MSR1P21757 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSR1P21757 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.14■□□□□ 0.34
MSR1P21757 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.14■□□□□ 0.33
MSR1P21757 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 Z82202.1-201ENST00000623446 1880 ntBASIC17.14■□□□□ 0.33
MSR1P21757 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MSR1P21757 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.14■□□□□ 0.33
MSR1P21757 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.14■□□□□ 0.33
MSR1P21757 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 TUBB8P6-201ENST00000436895 1288 ntBASIC17.14■□□□□ 0.33
MSR1P21757 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.14■□□□□ 0.33
MSR1P21757 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.14■□□□□ 0.33
MSR1P21757 KRT18P16-201ENST00000510337 1294 ntBASIC17.14■□□□□ 0.33
MSR1P21757 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.14■□□□□ 0.33
MSR1P21757 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.14■□□□□ 0.33
MSR1P21757 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.14■□□□□ 0.33
MSR1P21757 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSR1P21757 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
MSR1P21757 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.13■□□□□ 0.33
MSR1P21757 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
MSR1P21757 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MSR1P21757 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.13■□□□□ 0.33
MSR1P21757 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.13■□□□□ 0.33
MSR1P21757 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.13■□□□□ 0.33
MSR1P21757 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.13■□□□□ 0.33
MSR1P21757 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.13■□□□□ 0.33
MSR1P21757 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.13■□□□□ 0.33
MSR1P21757 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.13■□□□□ 0.33
MSR1P21757 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSR1P21757 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms