Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AC034268.1-201ENST00000441047 882 ntBASIC16.48■□□□□ 0.23
HIST1H1DP16402 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.48■□□□□ 0.23
HIST1H1DP16402 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H1DP16402 DUX4L16-201ENST00000555130 1264 ntBASIC16.48■□□□□ 0.23
HIST1H1DP16402 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
HIST1H1DP16402 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HIST1H1DP16402 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H1DP16402 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H1DP16402 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.48■□□□□ 0.23
HIST1H1DP16402 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.48■□□□□ 0.23
HIST1H1DP16402 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST1H1DP16402 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H1DP16402 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HIST1H1DP16402 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H1DP16402 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H1DP16402 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 ZNF815P-204ENST00000434898 1737 ntBASIC16.47■□□□□ 0.23
HIST1H1DP16402 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H1DP16402 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H1DP16402 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H1DP16402 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H1DP16402 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H1DP16402 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H1DP16402 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H1DP16402 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H1DP16402 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H1DP16402 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HIST1H1DP16402 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H1DP16402 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
HIST1H1DP16402 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H1DP16402 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H1DP16402 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H1DP16402 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H1DP16402 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H1DP16402 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H1DP16402 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.45■□□□□ 0.22
HIST1H1DP16402 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST1H1DP16402 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms