Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.99■■□□□ 1.11
HOXC6P09630 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.99■■□□□ 1.11
HOXC6P09630 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.99■■□□□ 1.11
HOXC6P09630 AL359075.1-203ENST00000462729 1002 ntBASIC21.99■■□□□ 1.11
HOXC6P09630 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.99■■□□□ 1.11
HOXC6P09630 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.99■■□□□ 1.11
HOXC6P09630 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.99■■□□□ 1.11
HOXC6P09630 AL121894.2-201ENST00000602977 491 ntBASIC21.99■■□□□ 1.11
HOXC6P09630 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HOXC6P09630 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HOXC6P09630 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.98■■□□□ 1.11
HOXC6P09630 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HOXC6P09630 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HOXC6P09630 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HOXC6P09630 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HOXC6P09630 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.98■■□□□ 1.11
HOXC6P09630 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HOXC6P09630 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HOXC6P09630 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
HOXC6P09630 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
HOXC6P09630 DUSP5P1-201ENST00000441325 1139 ntBASIC21.98■■□□□ 1.11
HOXC6P09630 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
HOXC6P09630 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HOXC6P09630 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
HOXC6P09630 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
HOXC6P09630 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
HOXC6P09630 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.97■■□□□ 1.11
HOXC6P09630 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.97■■□□□ 1.11
HOXC6P09630 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.97■■□□□ 1.11
HOXC6P09630 KRT18P38-201ENST00000449496 1282 ntBASIC21.97■■□□□ 1.11
HOXC6P09630 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.97■■□□□ 1.11
HOXC6P09630 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.97■■□□□ 1.11
HOXC6P09630 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.97■■□□□ 1.11
HOXC6P09630 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.97■■□□□ 1.11
HOXC6P09630 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
HOXC6P09630 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.97■■□□□ 1.11
HOXC6P09630 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HOXC6P09630 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.96■■□□□ 1.11
HOXC6P09630 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.96■■□□□ 1.11
HOXC6P09630 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.96■■□□□ 1.11
HOXC6P09630 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.96■■□□□ 1.11
HOXC6P09630 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.96■■□□□ 1.11
HOXC6P09630 AL136038.3-201ENST00000561909 1096 ntBASIC21.96■■□□□ 1.11
HOXC6P09630 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
HOXC6P09630 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
HOXC6P09630 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 KRT8P45-201ENST00000414328 1447 ntBASIC21.96■■□□□ 1.11
HOXC6P09630 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HOXC6P09630 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.96■■□□□ 1.11
HOXC6P09630 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC6P09630 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC6P09630 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.95■■□□□ 1.1
HOXC6P09630 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.95■■□□□ 1.1
HOXC6P09630 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
HOXC6P09630 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC6P09630 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.95■■□□□ 1.1
HOXC6P09630 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.95■■□□□ 1.1
HOXC6P09630 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.95■■□□□ 1.1
HOXC6P09630 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.95■■□□□ 1.1
HOXC6P09630 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.95■■□□□ 1.1
HOXC6P09630 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.95■■□□□ 1.1
HOXC6P09630 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC6P09630 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.95■■□□□ 1.1
HOXC6P09630 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
HOXC6P09630 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms