Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.77■□□□□ 0.28
CSF1P09603 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSF1P09603 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CSF1P09603 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSF1P09603 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSF1P09603 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSF1P09603 PGM5P4-201ENST00000421970 445 ntBASIC16.77■□□□□ 0.28
CSF1P09603 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.77■□□□□ 0.28
CSF1P09603 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.77■□□□□ 0.28
CSF1P09603 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.77■□□□□ 0.28
CSF1P09603 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSF1P09603 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.77■□□□□ 0.28
CSF1P09603 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.77■□□□□ 0.28
CSF1P09603 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.77■□□□□ 0.28
CSF1P09603 AL121832.2-201ENST00000610979 668 ntBASIC16.77■□□□□ 0.28
CSF1P09603 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.77■□□□□ 0.28
CSF1P09603 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSF1P09603 AL390961.4-201ENST00000623958 2535 ntBASIC16.77■□□□□ 0.28
CSF1P09603 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CSF1P09603 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSF1P09603 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSF1P09603 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CSF1P09603 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CSF1P09603 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSF1P09603 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CSF1P09603 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.77■□□□□ 0.27
CSF1P09603 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CSF1P09603 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.77■□□□□ 0.27
CSF1P09603 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.77■□□□□ 0.27
CSF1P09603 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.76■□□□□ 0.27
CSF1P09603 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.76■□□□□ 0.27
CSF1P09603 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1P09603 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1P09603 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.76■□□□□ 0.27
CSF1P09603 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.76■□□□□ 0.27
CSF1P09603 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CSF1P09603 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.76■□□□□ 0.27
CSF1P09603 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CSF1P09603 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1P09603 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CSF1P09603 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1P09603 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CSF1P09603 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CSF1P09603 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CSF1P09603 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CSF1P09603 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.75■□□□□ 0.27
CSF1P09603 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.75■□□□□ 0.27
CSF1P09603 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.75■□□□□ 0.27
CSF1P09603 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.75■□□□□ 0.27
CSF1P09603 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.75■□□□□ 0.27
CSF1P09603 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.75■□□□□ 0.27
CSF1P09603 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.75■□□□□ 0.27
CSF1P09603 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.75■□□□□ 0.27
CSF1P09603 AC231657.2-201ENST00000624556 255 ntBASIC16.75■□□□□ 0.27
CSF1P09603 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.75■□□□□ 0.27
CSF1P09603 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.75■□□□□ 0.27
CSF1P09603 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CSF1P09603 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.75■□□□□ 0.27
CSF1P09603 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1P09603 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms