Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP3P08254 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.54■■□□□ 1.04
MMP3P08254 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP3P08254 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP3P08254 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
MMP3P08254 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MMP3P08254 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP3P08254 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP3P08254 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP3P08254 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP3P08254 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP3P08254 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.54■■□□□ 1.04
MMP3P08254 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP3P08254 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.54■■□□□ 1.04
MMP3P08254 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP3P08254 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP3P08254 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
MMP3P08254 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
MMP3P08254 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
MMP3P08254 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.54■■□□□ 1.04
MMP3P08254 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP3P08254 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP3P08254 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP3P08254 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP3P08254 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP3P08254 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP3P08254 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP3P08254 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP3P08254 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP3P08254 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP3P08254 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP3P08254 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.53■■□□□ 1.04
MMP3P08254 AL031133.1-201ENST00000406807 723 ntBASIC21.53■■□□□ 1.04
MMP3P08254 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP3P08254 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP3P08254 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.53■■□□□ 1.04
MMP3P08254 AP003041.3-201ENST00000527151 707 ntBASIC21.53■■□□□ 1.04
MMP3P08254 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP3P08254 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.53■■□□□ 1.04
MMP3P08254 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP3P08254 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP3P08254 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MMP3P08254 AC011558.1-201ENST00000623459 338 ntBASIC21.53■■□□□ 1.04
MMP3P08254 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.53■■□□□ 1.04
MMP3P08254 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP3P08254 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP3P08254 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP3P08254 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP3P08254 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP3P08254 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP3P08254 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MMP3P08254 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP3P08254 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP3P08254 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.52■■□□□ 1.04
MMP3P08254 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP3P08254 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP3P08254 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP3P08254 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP3P08254 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP3P08254 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP3P08254 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP3P08254 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP3P08254 AL512604.3-201ENST00000569583 964 ntBASIC21.52■■□□□ 1.04
MMP3P08254 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.52■■□□□ 1.04
MMP3P08254 KRT8P11-201ENST00000409686 1436 ntBASIC21.52■■□□□ 1.04
MMP3P08254 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.52■■□□□ 1.03
MMP3P08254 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
MMP3P08254 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.52■■□□□ 1.03
MMP3P08254 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP3P08254 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP3P08254 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP3P08254 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP3P08254 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.51■■□□□ 1.03
MMP3P08254 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP3P08254 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
MMP3P08254 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP3P08254 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
MMP3P08254 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP3P08254 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP3P08254 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.51■■□□□ 1.03
MMP3P08254 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.51■■□□□ 1.03
MMP3P08254 AC092647.4-201ENST00000457211 535 ntBASIC21.51■■□□□ 1.03
MMP3P08254 AL358472.4-201ENST00000633140 710 ntBASIC21.51■■□□□ 1.03
MMP3P08254 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP3P08254 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP3P08254 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP3P08254 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MMP3P08254 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.51■■□□□ 1.03
MMP3P08254 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MMP3P08254 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP3P08254 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP3P08254 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.5■■□□□ 1.03
MMP3P08254 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP3P08254 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MMP3P08254 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MMP3P08254 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MMP3P08254 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.5■■□□□ 1.03
MMP3P08254 PRSS44-201ENST00000515154 1146 ntBASIC21.5■■□□□ 1.03
MMP3P08254 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.5■■□□□ 1.03
MMP3P08254 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms