Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.08■□□□□ 0.97
TIMP1P01033 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP1P01033 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP1P01033 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.08■□□□□ 0.96
TIMP1P01033 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TIMP1P01033 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.08■□□□□ 0.96
TIMP1P01033 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.08■□□□□ 0.96
TIMP1P01033 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP1P01033 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
TIMP1P01033 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP1P01033 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP1P01033 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP1P01033 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.07■□□□□ 0.96
TIMP1P01033 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP1P01033 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TIMP1P01033 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.07■□□□□ 0.96
TIMP1P01033 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP1P01033 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.07■□□□□ 0.96
TIMP1P01033 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TIMP1P01033 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP1P01033 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP1P01033 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP1P01033 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TIMP1P01033 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.07■□□□□ 0.96
TIMP1P01033 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.07■□□□□ 0.96
TIMP1P01033 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP1P01033 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.07■□□□□ 0.96
TIMP1P01033 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TIMP1P01033 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP1P01033 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TIMP1P01033 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TIMP1P01033 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
TIMP1P01033 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP1P01033 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TIMP1P01033 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP1P01033 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.06■□□□□ 0.96
TIMP1P01033 KRT8P11-201ENST00000409686 1436 ntBASIC21.06■□□□□ 0.96
TIMP1P01033 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP1P01033 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP1P01033 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP1P01033 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TIMP1P01033 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TIMP1P01033 TSSC2-201ENST00000450217 709 ntBASIC21.06■□□□□ 0.96
TIMP1P01033 UNC93B7-201ENST00000509439 705 ntBASIC21.06■□□□□ 0.96
TIMP1P01033 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.06■□□□□ 0.96
TIMP1P01033 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP1P01033 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP1P01033 SMG8-203ENST00000578922 2178 ntBASIC21.06■□□□□ 0.96
TIMP1P01033 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP1P01033 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP1P01033 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.05■□□□□ 0.96
TIMP1P01033 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
TIMP1P01033 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.05■□□□□ 0.96
TIMP1P01033 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP1P01033 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TIMP1P01033 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.05■□□□□ 0.96
TIMP1P01033 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.05■□□□□ 0.96
TIMP1P01033 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
TIMP1P01033 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP1P01033 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TIMP1P01033 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP1P01033 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP1P01033 AP001271.2-201ENST00000624018 1556 ntBASIC21.05■□□□□ 0.96
TIMP1P01033 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP1P01033 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.05■□□□□ 0.96
TIMP1P01033 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.05■□□□□ 0.96
TIMP1P01033 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP1P01033 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP1P01033 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP1P01033 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP1P01033 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMP1P01033 MIR3180-1-201ENST00000580374 94 ntBASIC21.04■□□□□ 0.96
TIMP1P01033 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMP1P01033 MIR3180-3-201ENST00000584616 94 ntBASIC21.04■□□□□ 0.96
TIMP1P01033 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP1P01033 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.04■□□□□ 0.96
TIMP1P01033 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP1P01033 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP1P01033 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP1P01033 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP1P01033 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMP1P01033 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TIMP1P01033 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMP1P01033 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.03■□□□□ 0.96
TIMP1P01033 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMP1P01033 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMP1P01033 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMP1P01033 AC016734.2-201ENST00000624325 1377 ntBASIC21.03■□□□□ 0.96
TIMP1P01033 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMP1P01033 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
TIMP1P01033 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
TIMP1P01033 BX276092.5-203ENST00000456199 560 ntBASIC21.03■□□□□ 0.96
TIMP1P01033 RASA4DP-201ENST00000460726 1199 ntBASIC21.03■□□□□ 0.96
TIMP1P01033 AC092597.1-201ENST00000487352 616 ntBASIC21.03■□□□□ 0.96
TIMP1P01033 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.03■□□□□ 0.96
TIMP1P01033 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMP1P01033 AC011498.5-201ENST00000592027 486 ntBASIC21.03■□□□□ 0.96
TIMP1P01033 AL121672.3-201ENST00000608644 468 ntBASIC21.03■□□□□ 0.96
TIMP1P01033 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TIMP1P01033 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms