Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NKX2-2O95096 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
NKX2-2O95096 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX2-2O95096 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX2-2O95096 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.94■□□□□ 0.46
NKX2-2O95096 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.94■□□□□ 0.46
NKX2-2O95096 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX2-2O95096 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.94■□□□□ 0.46
NKX2-2O95096 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.94■□□□□ 0.46
NKX2-2O95096 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.94■□□□□ 0.46
NKX2-2O95096 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 ITM2C-210ENST00000620962 501 ntBASIC17.94■□□□□ 0.46
NKX2-2O95096 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX2-2O95096 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX2-2O95096 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX2-2O95096 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX2-2O95096 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX2-2O95096 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX2-2O95096 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX2-2O95096 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-2O95096 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-2O95096 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX2-2O95096 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NKX2-2O95096 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX2-2O95096 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-2O95096 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-2O95096 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.93■□□□□ 0.46
NKX2-2O95096 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NKX2-2O95096 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-2O95096 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.93■□□□□ 0.46
NKX2-2O95096 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-2O95096 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NKX2-2O95096 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.93■□□□□ 0.46
NKX2-2O95096 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NKX2-2O95096 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX2-2O95096 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX2-2O95096 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-2O95096 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-2O95096 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-2O95096 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.93■□□□□ 0.46
NKX2-2O95096 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.93■□□□□ 0.46
NKX2-2O95096 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX2-2O95096 SDHAP1-207ENST00000440850 2000 ntBASIC17.93■□□□□ 0.46
NKX2-2O95096 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX2-2O95096 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NKX2-2O95096 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.92■□□□□ 0.46
NKX2-2O95096 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NKX2-2O95096 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-2O95096 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NKX2-2O95096 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NKX2-2O95096 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-2O95096 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NKX2-2O95096 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-2O95096 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NKX2-2O95096 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.92■□□□□ 0.46
NKX2-2O95096 C1QBPP2-201ENST00000528754 825 ntBASIC17.92■□□□□ 0.46
NKX2-2O95096 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-2O95096 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.92■□□□□ 0.46
NKX2-2O95096 HLA-A-209ENST00000638375 975 ntBASIC17.92■□□□□ 0.46
NKX2-2O95096 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NKX2-2O95096 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX2-2O95096 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX2-2O95096 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX2-2O95096 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-2O95096 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms