Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC8.7□□□□□ -1.02
USH2AO75445 AC134684.3-201ENST00000641758 218 ntBASIC8.7□□□□□ -1.02
USH2AO75445 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
USH2AO75445 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
USH2AO75445 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
USH2AO75445 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 CYMP-203ENST00000474680 1263 ntBASIC8.7□□□□□ -1.02
USH2AO75445 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC8.7□□□□□ -1.02
USH2AO75445 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC8.7□□□□□ -1.02
USH2AO75445 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC8.7□□□□□ -1.02
USH2AO75445 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC8.7□□□□□ -1.02
USH2AO75445 AL031284.1-201ENST00000419297 478 ntBASIC8.7□□□□□ -1.02
USH2AO75445 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC8.7□□□□□ -1.02
USH2AO75445 TUBB8P6-201ENST00000436895 1288 ntBASIC8.7□□□□□ -1.02
USH2AO75445 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC8.7□□□□□ -1.02
USH2AO75445 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC8.7□□□□□ -1.02
USH2AO75445 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC8.7□□□□□ -1.02
USH2AO75445 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC8.7□□□□□ -1.02
USH2AO75445 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 AC011484.1-201ENST00000377652 1995 ntBASIC8.7□□□□□ -1.02
USH2AO75445 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC8.7□□□□□ -1.02
USH2AO75445 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC8.7□□□□□ -1.02
USH2AO75445 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC8.7□□□□□ -1.02
USH2AO75445 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC8.7□□□□□ -1.02
USH2AO75445 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC8.7□□□□□ -1.02
USH2AO75445 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC8.7□□□□□ -1.02
USH2AO75445 BMF-207ENST00000559701 630 ntTSL 3 BASIC8.7□□□□□ -1.02
USH2AO75445 AP001005.1-201ENST00000571755 1248 ntBASIC8.7□□□□□ -1.02
USH2AO75445 AL773604.1-201ENST00000617417 272 ntBASIC8.7□□□□□ -1.02
USH2AO75445 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC8.7□□□□□ -1.02
USH2AO75445 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
USH2AO75445 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC8.7□□□□□ -1.02
USH2AO75445 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USH2AO75445 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
USH2AO75445 MIR662-201ENST00000384847 95 ntBASIC8.69□□□□□ -1.02
USH2AO75445 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC8.69□□□□□ -1.02
USH2AO75445 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC8.69□□□□□ -1.02
USH2AO75445 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
USH2AO75445 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC8.69□□□□□ -1.02
USH2AO75445 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC8.69□□□□□ -1.02
USH2AO75445 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC8.69□□□□□ -1.02
USH2AO75445 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC8.69□□□□□ -1.02
USH2AO75445 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC8.69□□□□□ -1.02
USH2AO75445 AC018553.1-201ENST00000616682 1458 ntBASIC8.69□□□□□ -1.02
USH2AO75445 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 LBH-204ENST00000406087 559 ntTSL 4 BASIC8.69□□□□□ -1.02
USH2AO75445 CHCHD2P8-201ENST00000429873 447 ntBASIC8.69□□□□□ -1.02
USH2AO75445 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC8.69□□□□□ -1.02
USH2AO75445 PNKD-204ENST00000436005 978 ntTSL 5 BASIC8.69□□□□□ -1.02
USH2AO75445 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC8.69□□□□□ -1.02
USH2AO75445 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC8.69□□□□□ -1.02
USH2AO75445 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC8.69□□□□□ -1.02
USH2AO75445 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC8.69□□□□□ -1.02
USH2AO75445 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC8.69□□□□□ -1.02
USH2AO75445 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
USH2AO75445 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC8.69□□□□□ -1.02
USH2AO75445 AC138894.3-201ENST00000603787 634 ntBASIC8.69□□□□□ -1.02
USH2AO75445 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC8.69□□□□□ -1.02
USH2AO75445 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
USH2AO75445 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC8.69□□□□□ -1.02
USH2AO75445 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC8.69□□□□□ -1.02
USH2AO75445 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC8.68□□□□□ -1.02
USH2AO75445 RASA4DP-201ENST00000460726 1199 ntBASIC8.68□□□□□ -1.02
USH2AO75445 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC8.68□□□□□ -1.02
USH2AO75445 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
USH2AO75445 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms