Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CPNE3O75131 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.63■□□□□ 0.57
CPNE3O75131 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CPNE3O75131 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CPNE3O75131 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE3O75131 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CPNE3O75131 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.62■□□□□ 0.57
CPNE3O75131 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.62■□□□□ 0.57
CPNE3O75131 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.62■□□□□ 0.57
CPNE3O75131 AC116562.2-201ENST00000507042 360 ntBASIC18.62■□□□□ 0.57
CPNE3O75131 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.62■□□□□ 0.57
CPNE3O75131 AC012306.2-201ENST00000609350 630 ntBASIC18.62■□□□□ 0.57
CPNE3O75131 AL445675.2-201ENST00000620291 557 ntBASIC18.62■□□□□ 0.57
CPNE3O75131 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 AL031985.4-201ENST00000642138 673 ntBASIC18.62■□□□□ 0.57
CPNE3O75131 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.62■□□□□ 0.57
CPNE3O75131 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.62■□□□□ 0.57
CPNE3O75131 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPNE3O75131 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CPNE3O75131 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE3O75131 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE3O75131 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE3O75131 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE3O75131 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.61■□□□□ 0.57
CPNE3O75131 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE3O75131 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.61■□□□□ 0.57
CPNE3O75131 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE3O75131 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
CPNE3O75131 AC026271.3-201ENST00000571884 352 ntBASIC18.61■□□□□ 0.57
CPNE3O75131 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.61■□□□□ 0.57
CPNE3O75131 AP000525.1-201ENST00000608286 694 ntBASIC18.61■□□□□ 0.57
CPNE3O75131 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CPNE3O75131 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE3O75131 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE3O75131 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CPNE3O75131 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CPNE3O75131 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPNE3O75131 AC079598.2-202ENST00000546624 1451 ntBASIC18.6■□□□□ 0.57
CPNE3O75131 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE3O75131 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE3O75131 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 KRT18P21-201ENST00000515767 1272 ntBASIC18.6■□□□□ 0.57
CPNE3O75131 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPNE3O75131 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE3O75131 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE3O75131 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.6■□□□□ 0.57
CPNE3O75131 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPNE3O75131 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE3O75131 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE3O75131 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE3O75131 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CPNE3O75131 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CPNE3O75131 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE3O75131 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.59■□□□□ 0.57
CPNE3O75131 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE3O75131 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms