Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 MIR4497-201ENST00000583208 89 ntBASIC18.69■□□□□ 0.58
PRICKLE3O43900 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE3O43900 CR392000.1-201ENST00000624770 1228 ntBASIC18.69■□□□□ 0.58
PRICKLE3O43900 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.69■□□□□ 0.58
PRICKLE3O43900 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE3O43900 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE3O43900 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE3O43900 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE3O43900 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE3O43900 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE3O43900 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE3O43900 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE3O43900 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PRICKLE3O43900 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE3O43900 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE3O43900 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE3O43900 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE3O43900 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE3O43900 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 ZNF815P-204ENST00000434898 1737 ntBASIC18.68■□□□□ 0.58
PRICKLE3O43900 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE3O43900 AC104417.2-201ENST00000562989 1793 ntBASIC18.68■□□□□ 0.58
PRICKLE3O43900 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.68■□□□□ 0.58
PRICKLE3O43900 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE3O43900 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.67■□□□□ 0.58
PRICKLE3O43900 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 TSPY7P-201ENST00000431358 1114 ntBASIC18.67■□□□□ 0.58
PRICKLE3O43900 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 SNORA78-201ENST00000459373 127 ntBASIC18.67■□□□□ 0.58
PRICKLE3O43900 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.67■□□□□ 0.58
PRICKLE3O43900 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.67■□□□□ 0.58
PRICKLE3O43900 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.67■□□□□ 0.58
PRICKLE3O43900 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PRICKLE3O43900 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PRICKLE3O43900 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.67■□□□□ 0.58
PRICKLE3O43900 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.67■□□□□ 0.58
PRICKLE3O43900 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE3O43900 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 LINC01465-201ENST00000408887 1940 ntBASIC18.66■□□□□ 0.58
PRICKLE3O43900 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE3O43900 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE3O43900 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE3O43900 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE3O43900 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE3O43900 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 AL160286.2-201ENST00000567150 934 ntBASIC18.66■□□□□ 0.58
PRICKLE3O43900 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 AC131212.4-201ENST00000623606 975 ntBASIC18.66■□□□□ 0.58
PRICKLE3O43900 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE3O43900 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE3O43900 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE3O43900 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PRICKLE3O43900 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE3O43900 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE3O43900 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms