Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSI1O43347 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
MSI1O43347 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSI1O43347 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSI1O43347 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MSI1O43347 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSI1O43347 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MSI1O43347 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MSI1O43347 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MSI1O43347 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
MSI1O43347 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSI1O43347 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSI1O43347 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.2■□□□□ 0.82
MSI1O43347 AC004980.1-204ENST00000429707 299 ntBASIC20.2■□□□□ 0.82
MSI1O43347 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MSI1O43347 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.2■□□□□ 0.82
MSI1O43347 NUDT16P1-203ENST00000513809 620 ntBASIC20.2■□□□□ 0.82
MSI1O43347 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MSI1O43347 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.2■□□□□ 0.82
MSI1O43347 AL355075.4-201ENST00000554988 638 ntBASIC20.2■□□□□ 0.82
MSI1O43347 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSI1O43347 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSI1O43347 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSI1O43347 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.2■□□□□ 0.82
MSI1O43347 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSI1O43347 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSI1O43347 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
MSI1O43347 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.19■□□□□ 0.82
MSI1O43347 AL158211.5-201ENST00000623583 2518 ntBASIC20.19■□□□□ 0.82
MSI1O43347 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.19■□□□□ 0.82
MSI1O43347 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MSI1O43347 TREX1-205ENST00000625293 1783 ntBASIC20.19■□□□□ 0.82
MSI1O43347 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MSI1O43347 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MSI1O43347 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MSI1O43347 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.19■□□□□ 0.82
MSI1O43347 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MSI1O43347 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MSI1O43347 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.19■□□□□ 0.82
MSI1O43347 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSI1O43347 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.19■□□□□ 0.82
MSI1O43347 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.19■□□□□ 0.82
MSI1O43347 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSI1O43347 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MSI1O43347 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSI1O43347 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.19■□□□□ 0.82
MSI1O43347 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSI1O43347 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
MSI1O43347 KRT17P2-201ENST00000300992 1314 ntBASIC20.19■□□□□ 0.82
MSI1O43347 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSI1O43347 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MSI1O43347 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSI1O43347 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSI1O43347 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.18■□□□□ 0.82
MSI1O43347 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.18■□□□□ 0.82
MSI1O43347 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
MSI1O43347 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
MSI1O43347 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.18■□□□□ 0.82
MSI1O43347 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.18■□□□□ 0.82
MSI1O43347 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.18■□□□□ 0.82
MSI1O43347 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.18■□□□□ 0.82
MSI1O43347 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.18■□□□□ 0.82
MSI1O43347 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.18■□□□□ 0.82
MSI1O43347 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.18■□□□□ 0.82
MSI1O43347 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.18■□□□□ 0.82
MSI1O43347 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.18■□□□□ 0.82
MSI1O43347 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.18■□□□□ 0.82
MSI1O43347 REXO1L10P-201ENST00000615707 1290 ntBASIC20.18■□□□□ 0.82
MSI1O43347 REXO1L12P-201ENST00000622156 912 ntBASIC20.18■□□□□ 0.82
MSI1O43347 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.18■□□□□ 0.82
MSI1O43347 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.18■□□□□ 0.82
MSI1O43347 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MSI1O43347 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
MSI1O43347 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSI1O43347 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.17■□□□□ 0.82
MSI1O43347 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MSI1O43347 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MSI1O43347 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.17■□□□□ 0.82
MSI1O43347 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MSI1O43347 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.17■□□□□ 0.82
MSI1O43347 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.17■□□□□ 0.82
MSI1O43347 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.17■□□□□ 0.82
MSI1O43347 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.17■□□□□ 0.82
MSI1O43347 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.17■□□□□ 0.82
MSI1O43347 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSI1O43347 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSI1O43347 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSI1O43347 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSI1O43347 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.17■□□□□ 0.82
MSI1O43347 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms