Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLOCKO15516 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLOCKO15516 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.42■□□□□ 0.54
CLOCKO15516 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CLOCKO15516 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.41■□□□□ 0.54
CLOCKO15516 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.41■□□□□ 0.54
CLOCKO15516 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.41■□□□□ 0.54
CLOCKO15516 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.41■□□□□ 0.54
CLOCKO15516 AC079598.2-202ENST00000546624 1451 ntBASIC18.41■□□□□ 0.54
CLOCKO15516 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
CLOCKO15516 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLOCKO15516 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.41■□□□□ 0.54
CLOCKO15516 AL355802.2-201ENST00000402069 882 ntBASIC18.41■□□□□ 0.54
CLOCKO15516 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLOCKO15516 PGM5P4-201ENST00000421970 445 ntBASIC18.41■□□□□ 0.54
CLOCKO15516 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.41■□□□□ 0.54
CLOCKO15516 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.41■□□□□ 0.54
CLOCKO15516 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.41■□□□□ 0.54
CLOCKO15516 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.41■□□□□ 0.54
CLOCKO15516 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLOCKO15516 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLOCKO15516 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLOCKO15516 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.41■□□□□ 0.54
CLOCKO15516 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.4■□□□□ 0.54
CLOCKO15516 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLOCKO15516 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CLOCKO15516 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.4■□□□□ 0.54
CLOCKO15516 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLOCKO15516 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CLOCKO15516 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.4■□□□□ 0.54
CLOCKO15516 AC007322.1-201ENST00000426983 750 ntBASIC18.4■□□□□ 0.54
CLOCKO15516 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.4■□□□□ 0.54
CLOCKO15516 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.4■□□□□ 0.54
CLOCKO15516 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.4■□□□□ 0.54
CLOCKO15516 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.4■□□□□ 0.54
CLOCKO15516 AC104771.1-201ENST00000603335 964 ntBASIC18.4■□□□□ 0.54
CLOCKO15516 AL356652.1-201ENST00000615962 565 ntBASIC18.4■□□□□ 0.54
CLOCKO15516 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.4■□□□□ 0.54
CLOCKO15516 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.4■□□□□ 0.54
CLOCKO15516 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.4■□□□□ 0.54
CLOCKO15516 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLOCKO15516 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.39■□□□□ 0.54
CLOCKO15516 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLOCKO15516 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLOCKO15516 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CLOCKO15516 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLOCKO15516 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.39■□□□□ 0.53
CLOCKO15516 AP001271.2-201ENST00000624018 1556 ntBASIC18.39■□□□□ 0.53
CLOCKO15516 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.39■□□□□ 0.53
CLOCKO15516 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLOCKO15516 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.39■□□□□ 0.53
CLOCKO15516 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLOCKO15516 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.39■□□□□ 0.53
CLOCKO15516 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLOCKO15516 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.39■□□□□ 0.53
CLOCKO15516 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CLOCKO15516 AC231657.2-201ENST00000624556 255 ntBASIC18.39■□□□□ 0.53
CLOCKO15516 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLOCKO15516 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLOCKO15516 LTB4R2-202ENST00000528054 3092 ntBASIC18.39■□□□□ 0.53
CLOCKO15516 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.39■□□□□ 0.53
CLOCKO15516 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.39■□□□□ 0.53
CLOCKO15516 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLOCKO15516 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLOCKO15516 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLOCKO15516 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLOCKO15516 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLOCKO15516 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CLOCKO15516 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CLOCKO15516 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLOCKO15516 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms