Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
UPK2O00526 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.58■□□□□ 0.08
UPK2O00526 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.58■□□□□ 0.08
UPK2O00526 MIR4758-201ENST00000577688 71 ntBASIC15.58■□□□□ 0.08
UPK2O00526 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.58■□□□□ 0.08
UPK2O00526 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.58■□□□□ 0.08
UPK2O00526 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.58■□□□□ 0.08
UPK2O00526 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK2O00526 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
UPK2O00526 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 AC141586.3-201ENST00000562166 1838 ntBASIC15.57■□□□□ 0.08
UPK2O00526 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
UPK2O00526 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.57■□□□□ 0.08
UPK2O00526 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.57■□□□□ 0.08
UPK2O00526 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.57■□□□□ 0.08
UPK2O00526 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.57■□□□□ 0.08
UPK2O00526 TSPY6P-201ENST00000448518 926 ntBASIC15.57■□□□□ 0.08
UPK2O00526 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.57■□□□□ 0.08
UPK2O00526 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.57■□□□□ 0.08
UPK2O00526 AC097658.1-201ENST00000475555 843 ntBASIC15.57■□□□□ 0.08
UPK2O00526 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.57■□□□□ 0.08
UPK2O00526 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.57■□□□□ 0.08
UPK2O00526 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.57■□□□□ 0.08
UPK2O00526 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.57■□□□□ 0.08
UPK2O00526 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.57■□□□□ 0.08
UPK2O00526 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
UPK2O00526 AC093503.3-201ENST00000624917 2352 ntBASIC15.57■□□□□ 0.08
UPK2O00526 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
UPK2O00526 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.57■□□□□ 0.08
UPK2O00526 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
UPK2O00526 AC092368.3-202ENST00000574180 1591 ntBASIC15.57■□□□□ 0.08
UPK2O00526 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.57■□□□□ 0.08
UPK2O00526 TEX21P-204ENST00000641479 1693 ntBASIC15.57■□□□□ 0.08
UPK2O00526 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK2O00526 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.56■□□□□ 0.08
UPK2O00526 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
UPK2O00526 MIR935-201ENST00000401179 91 ntBASIC15.56■□□□□ 0.08
UPK2O00526 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.56■□□□□ 0.08
UPK2O00526 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.56■□□□□ 0.08
UPK2O00526 NCF1B-203ENST00000435988 1254 ntBASIC15.56■□□□□ 0.08
UPK2O00526 GUSBP6-202ENST00000438529 1198 ntBASIC15.56■□□□□ 0.08
UPK2O00526 YBX1P10-201ENST00000444752 975 ntBASIC15.56■□□□□ 0.08
UPK2O00526 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.56■□□□□ 0.08
UPK2O00526 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.56■□□□□ 0.08
UPK2O00526 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.56■□□□□ 0.08
UPK2O00526 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.56■□□□□ 0.08
UPK2O00526 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.56■□□□□ 0.08
UPK2O00526 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
UPK2O00526 AL121906.2-201ENST00000621597 723 ntBASIC15.56■□□□□ 0.08
UPK2O00526 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.56■□□□□ 0.08
UPK2O00526 HLA-B-256ENST00000639848 1089 ntBASIC15.56■□□□□ 0.08
UPK2O00526 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
UPK2O00526 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.56■□□□□ 0.08
UPK2O00526 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
UPK2O00526 AP006587.1-201ENST00000534129 1502 ntBASIC15.56■□□□□ 0.08
UPK2O00526 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.56■□□□□ 0.08
UPK2O00526 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.56■□□□□ 0.08
UPK2O00526 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
UPK2O00526 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
UPK2O00526 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.55■□□□□ 0.08
UPK2O00526 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.55■□□□□ 0.08
UPK2O00526 AL161938.1-201ENST00000569833 2180 ntBASIC15.55■□□□□ 0.08
UPK2O00526 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UPK2O00526 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms