Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.92□□□□□ -0.02
NDUFA4O00483 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.92□□□□□ -0.02
NDUFA4O00483 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.92□□□□□ -0.02
NDUFA4O00483 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.92□□□□□ -0.02
NDUFA4O00483 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NDUFA4O00483 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NDUFA4O00483 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFA4O00483 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
NDUFA4O00483 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.91□□□□□ -0.02
NDUFA4O00483 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.91□□□□□ -0.02
NDUFA4O00483 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.91□□□□□ -0.02
NDUFA4O00483 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
NDUFA4O00483 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.91□□□□□ -0.02
NDUFA4O00483 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.91□□□□□ -0.02
NDUFA4O00483 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.91□□□□□ -0.02
NDUFA4O00483 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.91□□□□□ -0.02
NDUFA4O00483 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.91□□□□□ -0.02
NDUFA4O00483 AC233263.1-201ENST00000578059 224 ntBASIC14.91□□□□□ -0.02
NDUFA4O00483 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
NDUFA4O00483 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.91□□□□□ -0.02
NDUFA4O00483 AL023875.1-201ENST00000640777 796 ntBASIC14.91□□□□□ -0.02
NDUFA4O00483 AC073648.6-201ENST00000641589 218 ntBASIC14.91□□□□□ -0.02
NDUFA4O00483 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 AC005332.7-201ENST00000614046 2005 ntBASIC14.91□□□□□ -0.02
NDUFA4O00483 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.91□□□□□ -0.02
NDUFA4O00483 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.91□□□□□ -0.02
NDUFA4O00483 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NDUFA4O00483 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFA4O00483 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
NDUFA4O00483 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.9□□□□□ -0.02
NDUFA4O00483 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.9□□□□□ -0.02
NDUFA4O00483 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.9□□□□□ -0.02
NDUFA4O00483 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.9□□□□□ -0.02
NDUFA4O00483 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.9□□□□□ -0.02
NDUFA4O00483 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.9□□□□□ -0.02
NDUFA4O00483 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NDUFA4O00483 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NDUFA4O00483 KRASP1-201ENST00000407852 552 ntBASIC14.9□□□□□ -0.02
NDUFA4O00483 FAM201B-201ENST00000458407 597 ntBASIC14.9□□□□□ -0.02
NDUFA4O00483 AC133681.1-201ENST00000465482 601 ntBASIC14.9□□□□□ -0.02
NDUFA4O00483 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.9□□□□□ -0.02
NDUFA4O00483 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
NDUFA4O00483 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.9□□□□□ -0.02
NDUFA4O00483 RN7SL471P-201ENST00000580476 299 ntBASIC14.9□□□□□ -0.02
NDUFA4O00483 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.9□□□□□ -0.02
NDUFA4O00483 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
NDUFA4O00483 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NDUFA4O00483 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA4O00483 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NDUFA4O00483 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA4O00483 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA4O00483 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NDUFA4O00483 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA4O00483 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA4O00483 Z82202.1-201ENST00000623446 1880 ntBASIC14.89□□□□□ -0.03
NDUFA4O00483 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NDUFA4O00483 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA4O00483 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA4O00483 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA4O00483 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.89□□□□□ -0.03
NDUFA4O00483 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.89□□□□□ -0.03
NDUFA4O00483 AC128676.1-201ENST00000454392 318 ntBASIC14.89□□□□□ -0.03
NDUFA4O00483 KRT16P5-201ENST00000455284 522 ntBASIC14.89□□□□□ -0.03
NDUFA4O00483 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms