Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
HFM1A2PYH4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC28.84■■■□□ 2.21
HFM1A2PYH4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC28.84■■■□□ 2.21
HFM1A2PYH4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
HFM1A2PYH4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC28.84■■■□□ 2.21
HFM1A2PYH4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
HFM1A2PYH4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC28.84■■■□□ 2.21
HFM1A2PYH4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
HFM1A2PYH4 AC133561.5-201ENST00000635547 218 ntBASIC28.84■■■□□ 2.21
HFM1A2PYH4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
HFM1A2PYH4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
HFM1A2PYH4 SDHAP1-207ENST00000440850 2000 ntBASIC28.83■■■□□ 2.21
HFM1A2PYH4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
HFM1A2PYH4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC28.83■■■□□ 2.21
HFM1A2PYH4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
HFM1A2PYH4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC28.83■■■□□ 2.21
HFM1A2PYH4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
HFM1A2PYH4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC28.83■■■□□ 2.21
HFM1A2PYH4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
HFM1A2PYH4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
HFM1A2PYH4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
HFM1A2PYH4 MFAP1P1-201ENST00000442257 1255 ntBASIC28.83■■■□□ 2.21
HFM1A2PYH4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC28.83■■■□□ 2.21
HFM1A2PYH4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC28.83■■■□□ 2.21
HFM1A2PYH4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
HFM1A2PYH4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC28.83■■■□□ 2.21
HFM1A2PYH4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC28.83■■■□□ 2.21
HFM1A2PYH4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC28.83■■■□□ 2.2
HFM1A2PYH4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC28.82■■■□□ 2.2
HFM1A2PYH4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC28.82■■■□□ 2.2
HFM1A2PYH4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC28.82■■■□□ 2.2
HFM1A2PYH4 AC097488.1-201ENST00000507834 756 ntBASIC28.82■■■□□ 2.2
HFM1A2PYH4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC28.82■■■□□ 2.2
HFM1A2PYH4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC28.82■■■□□ 2.2
HFM1A2PYH4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
HFM1A2PYH4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC28.82■■■□□ 2.2
HFM1A2PYH4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HFM1A2PYH4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
HFM1A2PYH4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
HFM1A2PYH4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
HFM1A2PYH4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC28.81■■■□□ 2.2
HFM1A2PYH4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
HFM1A2PYH4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC28.81■■■□□ 2.2
HFM1A2PYH4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
HFM1A2PYH4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
HFM1A2PYH4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
HFM1A2PYH4 AC073130.3-201ENST00000624389 2278 ntBASIC28.8■■■□□ 2.2
HFM1A2PYH4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
HFM1A2PYH4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
HFM1A2PYH4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
HFM1A2PYH4 BID-204ENST00000399767 2129 ntTSL 2 BASIC28.8■■■□□ 2.2
HFM1A2PYH4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC28.8■■■□□ 2.2
HFM1A2PYH4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC28.8■■■□□ 2.2
HFM1A2PYH4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
HFM1A2PYH4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
HFM1A2PYH4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC28.8■■■□□ 2.2
HFM1A2PYH4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
HFM1A2PYH4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
HFM1A2PYH4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
HFM1A2PYH4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
HFM1A2PYH4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC28.8■■■□□ 2.2
HFM1A2PYH4 Z82202.1-201ENST00000623446 1880 ntBASIC28.8■■■□□ 2.2
HFM1A2PYH4 KRT8P11-201ENST00000409686 1436 ntBASIC28.8■■■□□ 2.2
HFM1A2PYH4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
HFM1A2PYH4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC28.79■■■□□ 2.2
HFM1A2PYH4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC28.79■■■□□ 2.2
HFM1A2PYH4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC28.79■■■□□ 2.2
HFM1A2PYH4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
HFM1A2PYH4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC28.79■■■□□ 2.2
HFM1A2PYH4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC28.79■■■□□ 2.2
HFM1A2PYH4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HFM1A2PYH4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC28.79■■■□□ 2.2
HFM1A2PYH4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HFM1A2PYH4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HFM1A2PYH4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HFM1A2PYH4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
HFM1A2PYH4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
HFM1A2PYH4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC28.78■■■□□ 2.2
HFM1A2PYH4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC28.78■■■□□ 2.2
HFM1A2PYH4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
HFM1A2PYH4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC28.78■■■□□ 2.2
HFM1A2PYH4 CKBP1-201ENST00000565489 1086 ntBASIC28.78■■■□□ 2.2
HFM1A2PYH4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
HFM1A2PYH4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
HFM1A2PYH4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
HFM1A2PYH4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC28.78■■■□□ 2.2
HFM1A2PYH4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
HFM1A2PYH4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC28.78■■■□□ 2.2
HFM1A2PYH4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC28.78■■■□□ 2.2
HFM1A2PYH4 TSPY14P-201ENST00000303979 915 ntBASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms