Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 C2orf69P4-201ENST00000565394 541 ntBASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CYP2T3P-201ENST00000601990 817 ntBASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-1A0A0K0K1D8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 TFP1-202ENST00000475455 1573 ntBASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 MKRN4P-201ENST00000444706 1521 ntBASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-1A0A0K0K1D8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRBV6-1A0A0K0K1D8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AL139246.5-201ENST00000606645 996 ntBASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 AC083906.6-201ENST00000641366 219 ntBASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-1A0A0K0K1D8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms