Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRGV4A0A0C4DH28 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV4A0A0C4DH28 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.97□□□□□ -0.17
TRGV4A0A0C4DH28 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRGV4A0A0C4DH28 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.97□□□□□ -0.17
TRGV4A0A0C4DH28 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 RPS2P52-201ENST00000469610 820 ntBASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRGV4A0A0C4DH28 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 AL158211.5-201ENST00000623583 2518 ntBASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 AC116351.2-201ENST00000606540 1585 ntBASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV4A0A0C4DH28 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 ID1-201ENST00000376105 1233 ntBASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 AC142086.2-201ENST00000569753 217 ntBASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 AC083880.1-201ENST00000608266 535 ntBASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 AL121906.2-201ENST00000621597 723 ntBASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV4A0A0C4DH28 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV4A0A0C4DH28 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms