Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV8-1A0A0A6YYK1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC105020.6-201ENST00000621523 1217 ntBASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC006333.2-201ENST00000607957 2099 ntBASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AL162412.1-201ENST00000567129 965 ntBASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MFSD11-216ENST00000590393 1141 ntBASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC013268.1-206ENST00000638368 961 ntBASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC112229.1-201ENST00000639295 961 ntBASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV8-1A0A0A6YYK1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms